Evidence map›Paper›PMID 37270437›Full record

ArticleGeroScience2024

DNA methylation clocks for clawed frogs reveal evolutionary conservation of epigenetic aging.

Joseph A Zoller, Eleftheria Parasyraki, Ake T Lu, Amin Haghani, Christof Niehrs, Steve Horvath

Open access · hybridAbstract read
In one paragraph

Article in GeroScience, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
3.1field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 20 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. State-of-the-Art Age Determination Methods for Amphibians and Reptiles.Animals : an open access journal from MDPI · 2025
    Review
  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Approaching the mystery of aging by the epigenetic clock.Primates; journal of primatology · 2024
    Article
  11. Article
  12. Somatic mutation as an explanation for epigenetic aging.bioRxiv : the preprint server for biology · 2023
    Article
  13. DNA methylation extends lifespan in the bumblebeeProceedings. Biological sciences · 2023
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 2 countries.

Joseph A Zoller *Department of Biostatistics, School of Public Health, University of California, Los Angeles, Los Angeles, CA, USA.
Eleftheria Parasyraki *Institute of Molecular Biology (IMB), Mainz, Germany.
Ake T LuDepartment of Human Genetics, David Geffen School of Medicine, University of California, Los Angeles, Los Angeles, CA, USA.
Amin HaghaniDepartment of Human Genetics, David Geffen School of Medicine, University of California, Los Angeles, Los Angeles, CA, USA.
Christof NiehrsInstitute of Molecular Biology (IMB), Mainz, Germany. c.niehrs@imb-mainz.de.
Steve HorvathDepartment of Biostatistics, School of Public Health, University of California, Los Angeles, Los Angeles, CA, USA. shorvath@mednet.ucla.edu.ORCID 0000-0002-4110-3589
University of California, Los Angeles · USGerman Cancer Research Center · DEInstitute of Molecular Biology · DE

Funding

CSRD VA 1
6 · The paper itself

Abstract

To address how conserved DNA methylation-based epigenetic aging is in diverse branches of the tree of life, we generated DNA methylation data from African clawed frogs (Xenopus laevis) and Western clawed frogs (Xenopus tropicalis) and built multiple epigenetic clocks. Dual species clocks were developed that apply to both humans and frogs (human-clawed frog clocks), supporting that epigenetic aging processes are evolutionary conserved outside mammals. Highly conserved positively age-related CpGs are located in neural-developmental genes such as uncx, tfap2d as well as nr4a2 implicated in age-associated disease. We conclude that signatures of epigenetic aging are evolutionary conserved between frogs and mammals and that the associated genes relate to neural processes, altogether opening opportunities to employ Xenopus as a model organism to study aging.

Indexed as

AgingDNA MethylationAnimalsEpigenesis, GeneticHumansMammalsXenopusXenopus laevisBiomarker of agingClawed frogEpigenetic clockEvolutionMethylation

Identifiers

PMID37270437
PMCPMC10828168
OpenAlexW4379261037

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.