Evidence map›Paper›PMID 37267450›Full record

ArticleAnnals of botany2023

Shared pedigree relationships and transmission of unreduced gametes in cultivated banana.

Guillaume Martin, Franc-Christophe Baurens, Karine Labadie, Catherine Hervouet, Frédéric Salmon, Franck Marius, Nilda Paulo-de-la-Reberdiere, Ines Van den Houwe, Jean-Marc Aury, Angélique D'Hont and 1 more

Open access · hybridAbstract read
In one paragraph

Article in Annals of botany, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
4.8field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 12 citations in OpenAlex.

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  7. Striking variation in chromosome structure withinFrontiers in plant science · 2024
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 4 institutions in 2 countries.

Guillaume MartinCIRAD, UMR AGAP Institut, Montpellier F-34398, France.ORCID 0000-0002-1801-7500
Franc-Christophe BaurensCIRAD, UMR AGAP Institut, Montpellier F-34398, France.ORCID 0000-0002-5219-8771
Karine LabadieGenoscope, Institut François Jacob, CEA, Université Paris-Saclay, Evry, France.
Catherine HervouetCIRAD, UMR AGAP Institut, Montpellier F-34398, France.
Frédéric SalmonUMR AGAP Institut, Université Montpellier, CIRAD, INRAE, Institut Agro, Montpellier, France.
Franck MariusUMR AGAP Institut, Université Montpellier, CIRAD, INRAE, Institut Agro, Montpellier, France.
Nilda Paulo-de-la-ReberdiereUMR AGAP Institut, Université Montpellier, CIRAD, INRAE, Institut Agro, Montpellier, France.
Ines Van den HouweBioversity International, Willem De Croylaan 42, B-3001, Leuven, Belgium.
Jean-Marc AuryGénomique Métabolique, Genoscope, Institut François Jacob, CEA, CNRS, Université Evry, Université Paris-Saclay, Evry, France.ORCID 0000-0003-1718-3010
Angélique D'HontCIRAD, UMR AGAP Institut, Montpellier F-34398, France.
Nabila YahiaouiCIRAD, UMR AGAP Institut, Montpellier F-34398, France.
Centre de Coopération Internationale en Recherche Agronomique pour le Développement · FRAlliance Bioversity International - CIAT · ITCentre National de la Recherche Scientifique · FRCommissariat à l'Énergie Atomique et aux Énergies Alternatives · FR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

BACKGROUND AND

aimsCultivated bananas resulted from inter(sub)specific hybridizations involving Musa species and subspecies (M. acuminata subspecies, M. schizocarpa, M. balbisiana) and the subsequent selection, centuries ago, of hybrids with parthenocarpic, seedless fruits. Cultivars have low fertility and are vegetatively propagated, forming groups of somaclones. Relatively few of them, mainly triploids, are grown on a large scale and characterization of their parental relationships may be useful for breeding strategies. Here we investigate parental relationships and gamete-type contributions among diploid and polyploid banana cultivars.

methodsWe used SNP genotyping data from whole-genome sequencing of 178 banana individuals, including 111 cultivars, 55 wild bananas and 12 synthetic F1 hybrids. We analysed the proportion of SNP sites in accordance with direct parentage with a global statistic and along chromosomes for selected individuals. KEY

resultsWe characterized parentage relationships for 7 diploid cultivars, 11 triploid cultivars and 1 tetraploid cultivar. Results showed that both diploid and triploid cultivars could have contributed gametes to other banana cultivars. Diploids may have contributed 1x or 2x gametes and triploids 1x to 3x gametes. The Mchare diploid cultivar group, nowadays only found in East Africa, was found as parent of two diploid and eight triploid cultivars. In five of its identified triploid offspring, corresponding to main export or locally popular dessert bananas, Mchare contributed a 2x gamete with full genome restitution without recombination. Analyses of remaining haplotypes in these Mchare offspring suggested ancestral pedigree relationships between different interspecific banana cultivars.

conclusionsThe current cultivated banana resulted from different pathways of formation, with implication of recombined or un-recombined unreduced gametes produced by diploid or triploid cultivars. Identification of dessert banana's parents and the types of gametes they contributed should support the design of breeding strategies.

Indexed as

MusaTriploidyDiploidyGerm CellsHybridization, Geneticbanana cultivarsMchareMusa acuminataMusa balbisianaMusa schizocarpaparentagepolyploidunreduced gametewhole genome approach

Identifiers

PMID37267450
PMCPMC10457027
OpenAlexW4379197714

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.