Evidence map›Paper›PMID 37265662›Full record

ArticleFrontiers in medicine2022

An exome-wide study of renal operational tolerance.

Annick Massart, Richard Danger, Catharina Olsen, Mary J Emond, Ondrej Viklicky, Valérie Jacquemin, Julie Soblet, Sarah Duerinckx, Didier Croes, Camille Perazzolo and 14 more

Erratum issued 2 registry-linked trialsOpen access · goldAbstract read
In one paragraph

Article in Frontiers in medicine, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. It is linked to 2 registered trials, which are not on this map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
0.8field-weighted citation impact, top 32% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

NCT03652402 completednot on this map

The EUropean TRAnsplantation and INnovation Consortium for Risk Stratification in Kidney Transplant Patients

TypeobservationalSponsorAssistance Publique - Hôpitaux de ParisRan2018 to 2021Enrolled558ConditionsKidney Transplant Rejection, Kidney Transplantation, Risk Stratification, PrognosisArmskidney transplantation
NCT05124444 nacompletednot on this map

TOlerance MOlecular and Genome-wide Studies With Renal Allograft Recipient Material

TypeinterventionalSponsorUniversité Libre de BruxellesRan2015 to 2021Enrolled18ConditionsKidney TransplantationArmsHigh throughput DNA and RNA sequencing
3 · Its place in the literature

Who cites it

0 citing papers in PubMed, 3 citations in OpenAlex.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

24 authors at 11 institutions in 8 countries.

Annick Massart *Human Genetics Unit, Institut de Recherche Interdisciplinaire en Biologie Humaine et Moléculaire (IRIBHM), Université Libre de Bruxelles (ULB), Brussels, Belgium.
Richard Danger *CHU Nantes, Nantes Université, INSERM, Center for Research in Transplantation and Translational Immunology, CR2TI, UMR 1064, ITUN, Nantes, France.
Catharina Olsen *Interuniversity Institute of Bioinformatics in Brussels (IB2), Université Libre de Bruxelles - Vrije Universiteit Brussel (ULB-VUB), Brussels, Belgium.
Mary J EmondDepartment of Biostatistics, University of Washington, Seattle, WA, United States.
Ondrej ViklickyTransplant Laboratory, Institute for Clinical and Experimental Medicine, Prague, Czechia.
Valérie JacqueminHuman Genetics Unit, Institut de Recherche Interdisciplinaire en Biologie Humaine et Moléculaire (IRIBHM), Université Libre de Bruxelles (ULB), Brussels, Belgium.
Julie SobletInteruniversity Institute of Bioinformatics in Brussels (IB2), Université Libre de Bruxelles - Vrije Universiteit Brussel (ULB-VUB), Brussels, Belgium.
Sarah DuerinckxHuman Genetics Unit, Institut de Recherche Interdisciplinaire en Biologie Humaine et Moléculaire (IRIBHM), Université Libre de Bruxelles (ULB), Brussels, Belgium.
Didier CroesInteruniversity Institute of Bioinformatics in Brussels (IB2), Université Libre de Bruxelles - Vrije Universiteit Brussel (ULB-VUB), Brussels, Belgium.
Camille PerazzoloHuman Genetics Unit, Institut de Recherche Interdisciplinaire en Biologie Humaine et Moléculaire (IRIBHM), Université Libre de Bruxelles (ULB), Brussels, Belgium.
Petra HrubaTransplant Laboratory, Institute for Clinical and Experimental Medicine, Prague, Czechia.
Dorien DaneelsInteruniversity Institute of Bioinformatics in Brussels (IB2), Université Libre de Bruxelles - Vrije Universiteit Brussel (ULB-VUB), Brussels, Belgium.
Ben CaljonBrussels Interuniversity Genomics High Throughput Core (BRIGHTcore), VUB-ULB, Brussels, Belgium.
Mehmet Sukru SeverIstanbul Tip Fakültesi, Istanbul School of Medicine, Internal Medicine, Nephrology, Istanbul, Türkiye.
Julio PascualDepartment of Nephrology, Hospital del Mar, Institute Mar for Medical Research, Barcelona, Spain.
Marius MiglinasNephrology Center, Santaros Klinikos, Medical Faculty, Vilnius University, Vilnius, Lithuania.
Renal Tolerance Investigators
Isabelle PirsonHuman Genetics Unit, Institut de Recherche Interdisciplinaire en Biologie Humaine et Moléculaire (IRIBHM), Université Libre de Bruxelles (ULB), Brussels, Belgium.
Lidia GhisdalDepartment of Nephrology, Hospital Centre EpiCURA, Baudour, Belgium.
Guillaume SmitsInteruniversity Institute of Bioinformatics in Brussels (IB2), Université Libre de Bruxelles - Vrije Universiteit Brussel (ULB-VUB), Brussels, Belgium.
Magali GiralCHU Nantes, Nantes Université, INSERM, Center for Research in Transplantation and Translational Immunology, CR2TI, UMR 1064, ITUN, Nantes, France.
Daniel AbramowiczDepartment of Nephrology, Antwerp University Hospital and Laboratory of Experimental Medicine, University of Antwerp, Antwerp, Belgium.
Marc AbramowiczHuman Genetics Unit, Institut de Recherche Interdisciplinaire en Biologie Humaine et Moléculaire (IRIBHM), Université Libre de Bruxelles (ULB), Brussels, Belgium.
Sophie BrouardCHU Nantes, Nantes Université, INSERM, Center for Research in Transplantation and Translational Immunology, CR2TI, UMR 1064, ITUN, Nantes, France.
Université Libre de Bruxelles · BEInserm · FRInstitute of Clinical and Experimental Medicine · CZUniversity of Geneva · CHCliniques Universitaires Saint-Luc · BEHospital Universitario 12 De Octubre · ESIstanbul University · TRUniversity of Antwerp · BEUniversity of Washington · USVilnius University · LTVrije Universiteit Brussel · BE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Background: Renal operational tolerance is a rare and beneficial state of prolonged renal allograft function in the absence of immunosuppression. The underlying mechanisms are unknown. We hypothesized that tolerance might be driven by inherited protein coding genetic variants with large effect, at least in some patients. Methods: We set up a European survey of over 218,000 renal transplant recipients and collected DNAs from 40 transplant recipients who maintained good allograft function without immunosuppression for at least 1 year. We performed an exome-wide association study comparing the distribution of moderate to high impact variants in 36 tolerant patients, selected for genetic homogeneity using principal component analysis, and 192 controls, using an optimal sequence-kernel association test adjusted for small samples. Results: We identified rare variants of Conclusion: Rare protein coding variants are associated with operational tolerance in a sizable portion of patients. Our findings have important implications for a better understanding of immune tolerance in transplantation and other fields of medicine.ClinicalTrials.gov, identifier: NCT05124444.

Indexed as

exome sequencingHomer2IQCHLCN2NGALoperational toleranceprimary ciliumrenal transplantation

Identifiers

PMID37265662
PMCPMC10230038
OpenAlexW4376875579

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.