Evidence map›Paper›PMID 37265549›Full record

ArticleEcology and evolution2022

The genome and diet of a 35,000-year-old

Jean-Marc Elalouf, Pauline Palacio, Céline Bon, Véronique Berthonaud, Frédéric Maksud, Thomas W Stafford, Christophe Hitte

Open access · goldAbstract read
In one paragraph

Article in Ecology and evolution, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
0.6field-weighted citation impact, top 28% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 3 citations in OpenAlex.

  1. Article
  2. The genome and diet of a 35,000-year-oldEcology and evolution · 2022
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 1 institution in 1 country.

Jean-Marc ElaloufInstitute for Integrative Biology of the Cell (I2BC) Institut des Sciences du vivant Frédéric Joliot, CNRS UMR 9198, CEA Saclay Gif-sur-Yvette cedex France.ORCID https://orcid.org/0000-0003-0151-6423
Pauline PalacioInstitute for Integrative Biology of the Cell (I2BC) Institut des Sciences du vivant Frédéric Joliot, CNRS UMR 9198, CEA Saclay Gif-sur-Yvette cedex France.
Céline BonInstitute for Integrative Biology of the Cell (I2BC) Institut des Sciences du vivant Frédéric Joliot, CNRS UMR 9198, CEA Saclay Gif-sur-Yvette cedex France.
Véronique BerthonaudInstitute for Integrative Biology of the Cell (I2BC) Institut des Sciences du vivant Frédéric Joliot, CNRS UMR 9198, CEA Saclay Gif-sur-Yvette cedex France.
Frédéric MaksudService Régional de l'Archéologie Toulouse cedex 6 France.
Thomas W StaffordStafford Research Albuquerque New Mexico USA.
Christophe HitteUniv Rennes, CNRS, IGDR-UMR 6290 Rennes France.
Centre National de la Recherche Scientifique · FR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The Chauvet-Pont-d'Arc Cave (Ardèche, France) contains some of the oldest Paleolithic paintings recorded to date, as well as thousands of bones of the extinct cave bear, and some remains and footprints of other animals. As part of the interdisciplinary research project devoted to this reference cave site, we analyzed a coprolite collected within the deep cave. AMS radiocarbon dating of bone fragments from the coprolite yielded an age of 30,450 ± 550 RC yr. BP (AAR-19656; 36,150-34,000 cal BP), similar to ages assigned to Paleolithic artwork and cave bear remains from the same cave sector. Using high-throughput shotgun DNA sequencing, we demonstrated a high abundance of canid DNA and lesser amounts of DNA from the extinct cave bear. We interpret the sample as feces from a canid that had consumed cave bear tissue. The high amount of canid DNA allowed us to reconstruct a complete canid mitochondrial genome sequence (average coverage: 83×) belonging to a deeply divergent clade of extinct mitochondrial wolf lineages that are most closely related to coeval (~35 ka) Belgian wolves. Analysis of the nuclear genome yielded a similar coverage for the X chromosome (2.4×) and the autosomes (range: 2.3-3.2×), indicating that the Chauvet canid was a female. Comparing the relationship of the nuclear genome of this specimen with that of a variety of canids, we found it more closely related to gray wolves' genomes than to other wild canid or dog genomes, especially wolf genomes from Europe and the Middle East. We conclude that the coprolite is feces from an animal within an extinct wolf lineage. The consumption of cave bear by this wolf likely explains its intrusion into the dark cave sectors and sheds new light on the paleoecology of a major cave site.

Indexed as

ancient DNAcanidcave bearPaleogenomics

Identifiers

PMID37265549
PMCPMC10231653
OpenAlexW4293027461

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.