Evidence map›Paper›PMID 37265401›Full record

ArticleJournal of immunology (Baltimore, Md. : 1950)2023

Regulation of CD8 T Cell Differentiation by the RNA-Binding Protein DDX5.

Tiani L Louis, William H Wong, Priscilla Yao, Nadia S Kurd, Tiffani Tysl, Cynthia S Indralingam, Shengyun Ma, Wendy Jia Men Huang, John T Chang

Open access · greenAbstract read
In one paragraph

Article in Journal of immunology (Baltimore, Md. : 1950), 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.5field-weighted citation impact, top 31% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 3 citations in OpenAlex.

  1. Review
  2. Review
  3. Article
  4. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 2 institutions in 1 country.

Tiani L LouisDepartment of Medicine, University of California San Diego, La Jolla, CA.
William H WongDepartment of Medicine, University of California San Diego, La Jolla, CA.
Priscilla YaoDepartment of Medicine, University of California San Diego, La Jolla, CA.ORCID 0000-0002-4700-6851
Nadia S KurdDepartment of Medicine, University of California San Diego, La Jolla, CA.
Tiffani TyslDepartment of Medicine, University of California San Diego, La Jolla, CA.ORCID 0000-0002-8415-4255
Cynthia S IndralingamDepartment of Medicine, University of California San Diego, La Jolla, CA.
Shengyun MaDepartment of Cellular and Molecular Medicine, University of California San Diego, La Jolla, CA.ORCID 0000-0003-3368-9388
Wendy Jia Men HuangDepartment of Cellular and Molecular Medicine, University of California San Diego, La Jolla, CA.ORCID 0000-0001-7425-8280
John T ChangDepartment of Medicine, University of California San Diego, La Jolla, CA.ORCID 0000-0003-0873-6218
University of California San Diego · USMorpho (United States) · US

Funding

VIRAL MALIGNANCYP30CA023100 · NCI · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI Jesse Nodora · 1985 to 2026
$124.9M
San Diego Digestive Diseases Research CenterP30DK120515 · NIDDK · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI Bernd G. Schnabl · 2019 to 2026
$10.8M
Single-Cell Transcriptomic and Epigenetics CoreP01AI132122 · NIAID · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI ZUNIGA, ELINA I · 2018 to 2022
$9.8M
Using single-cell RNA-seq to interrogate host immunity to pathogensR01AI123202 · NIAID · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI CHANG, JOHN T, YEO, EUGENE WEI-MING · 2016 to 2020
$3.1M
Role of proteasome activity in adaptive immunityR01AI129973 · NIAID · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI CHANG, JOHN T · 2018 to 2022
$2.2M
Post-translational modifications in RORgt-dependent immune cell functionsR01GM124494 · NIGMS · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI HUANG, WENDY JIA MEN · 2017 to 2021
$2.0M
Illumina NovaSeq 6000 Sequencing SystemS10OD026929 · OD · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI JEPSEN, KRISTEN LYNN · 2019 to 2019
$600k
T cell subsets in inflammatory bowel diseaseI01CX002396 · VA · VA SAN DIEGO HEALTHCARE SYSTEM · PI John T Chang · 2022 to 2026
–
Transcriptional regulation of T cell immunityI01BX005106 · VA · VA SAN DIEGO HEALTHCARE SYSTEM · PI CHANG, JOHN T · 2021 to 2024
–
BLRD VA I01 BX005106CSRD VA I01 CX002396NCI NIH HHS P30 CA023100NIAID NIH HHS P01 AI132122NIAID NIH HHS R01 AI123202NIAID NIH HHS R01 AI129973NIDDK NIH HHS P30 DK120515NIGMS NIH HHS R01 GM124494NIH HHS S10 OD026929
6 · The paper itself

Abstract

The RNA-binding protein DEAD-box protein 5 (DDX5) is a polyfunctional regulator of gene expression, but its role in CD8+ T cell biology has not been extensively investigated. In this study, we demonstrate that deletion of DDX5 in murine CD8+ T cells reduced the differentiation of terminal effector, effector memory T, and terminal effector memory cells while increasing the generation of central memory T cells, whereas forced expression of DDX5 elicited the opposite phenotype. DDX5-deficient CD8+ T cells exhibited increased expression of genes that promote central memory T cell differentiation, including Tcf7 and Eomes. Taken together, these findings reveal a role for DDX5 in regulating the differentiation of effector and memory CD8+ T cell subsets in response to microbial infection.

Indexed as

CD8-Positive T-LymphocytesT-Lymphocyte SubsetsAnimalsCell DifferentiationDEAD-box RNA HelicasesImmunologic MemoryLymphocyte ActivationMiceT-Box Domain ProteinsDdx5 protein, mouseDEAD-box RNA HelicasesT-Box Domain Proteins

Identifiers

PMID37265401
PMCPMC10373580
OpenAlexW4379093543

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.