Evidence map›Paper›PMID 37264881›Full record

ArticleEuropean journal of medical genetics2023

Disruption of FBN1 by an Alu element insertion: A novel genetic cause of Marfan syndrome.

Benjamin M Helm, Amanda M Smith, Kelly Schmit, Benjamin J Landis, Matteo Vatta, Stephanie M Ware

Open access · greenAbstract read
In one paragraph

Article in European journal of medical genetics, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
0.6field-weighted citation impact, top 25% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed, 2 citations in OpenAlex.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 1 country.

Benjamin M HelmDepartment of Medical & Molecular Genetics, Indiana University School of Medicine, Indianapolis, IN, USA; Department of Epidemiology, Indiana University Fairbanks School of Public Health, Indianapolis, IN, USA. Electronic address: bmhelm@iu.edu.
Amanda M SmithDepartment of Pediatrics, Indiana University School of Medicine, Indianapolis, IN, USA.
Kelly SchmitDepartment of Medical & Molecular Genetics, Indiana University School of Medicine, Indianapolis, IN, USA. Electronic address: schmitk@iu.edu.
Benjamin J LandisDepartment of Pediatrics, Indiana University School of Medicine, Indianapolis, IN, USA. Electronic address: benjland@iu.edu.
Matteo VattaInvitae Corporation, San Francisco, CA, USA. Electronic address: matteo.vatta@invitae.com.
Stephanie M WareDepartment of Medical & Molecular Genetics, Indiana University School of Medicine, Indianapolis, IN, USA; Department of Pediatrics, Indiana University School of Medicine, Indianapolis, IN, USA. Electronic address: stware@iu.edu.
Indiana University School of MedicineIndiana University – Purdue University Indianapolis · USInvitae (United States) · US

Funding

Investigating the role of mitochondria in thoracic aortic aneurysm pathogenesisK23HL141667 · NHLBI · INDIANA UNIVERSITY INDIANAPOLIS · PI LANDIS, BENJAMIN JOHN · 2019 to 2023
$810k
NHLBI NIH HHS K23 HL141667
6 · The paper itself

Abstract

Alu elements are retrotransposons with ubiquitous presence in the human genome that have contributed to human genomic diversity and health. These approximately 300-bp sequences can cause or mediate disease by disrupting coding/splicing regions in the germline, by insertional mutagenesis in somatic cells, and in promoting formation of copy-number variants. Alu elements may also disrupt epigenetic regulation by affecting non-coding regulatory regions. There are increasing reports of apparently sporadic and inherited genetic disorders caused by Alu-related gene disruption, but Marfan syndrome resulting from Alu element insertion has not been previously described. We report a family with classic features of Marfan syndrome whose previous FBN1 genetic testing was inconclusive. Using contemporary next-generation sequencing and bioinformatics analysis, a pathogenic/disruptive Alu insertion occurring in the coding region of the FBN1 gene was identified (c.6564_6565insAlu; p. Glu2189fs) and was confirmed and specified further with Sanger sequencing. This identified the molecular basis of disease in the family that was missed using previous genetic testing technologies and highlights a novel pathogenic mechanism for Marfan syndrome. This case adds to the growing literature of Mendelian diseases caused by Alu retrotransposition, and it also shows the growing capability of genomic technologies for detecting atypical mutation events.

Indexed as

Marfan SyndromeAdipokinesAlu ElementsEpigenesis, GeneticFibrillin-1Genetic TestingHumansMutationAdipokinesFBN1 protein, humanFibrillin-1AluFBN1MarfanMitral valve prolapseThoracic aortic aneurysmTransposable element

Identifiers

PMID37264881
PMCPMC11670311
OpenAlexW4367550360

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.