Evidence map›Paper›PMID 37264351›Full record

ArticleBMC plant biology2023

Combined transcriptomic and metabolomic analyses of high temperature stress response of quinoa seedlings.

Heng Xie, Ping Zhang, Chunhe Jiang, Qianchao Wang, Yirui Guo, Xuesong Zhang, Tingzhi Huang, Junna Liu, Li Li, Hanxue Li and 2 more

Open access · goldAbstract read
In one paragraph

Article in BMC plant biology, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
6.4field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed, 32 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 1 institution in 1 country.

Heng Xie *College of Agronomy and Biotechnology, Yunnan Agricultural University, Kunming, 650201, China.
Ping Zhang *College of Agronomy and Biotechnology, Yunnan Agricultural University, Kunming, 650201, China.
Chunhe Jiang *Academic Affairs Office, Yunnan Agricultural University, Kunming, 650201, China.
Qianchao WangCollege of Agronomy and Biotechnology, Yunnan Agricultural University, Kunming, 650201, China.
Yirui GuoCollege of Agronomy and Biotechnology, Yunnan Agricultural University, Kunming, 650201, China.
Xuesong ZhangCollege of Agronomy and Biotechnology, Yunnan Agricultural University, Kunming, 650201, China.
Tingzhi HuangCollege of Agronomy and Biotechnology, Yunnan Agricultural University, Kunming, 650201, China.
Junna LiuCollege of Agronomy and Biotechnology, Yunnan Agricultural University, Kunming, 650201, China.
Li LiCollege of Agronomy and Biotechnology, Yunnan Agricultural University, Kunming, 650201, China.
Hanxue LiCollege of Agronomy and Biotechnology, Yunnan Agricultural University, Kunming, 650201, China.
Hongxin WangCollege of Agronomy and Biotechnology, Yunnan Agricultural University, Kunming, 650201, China.
Peng QinCollege of Agronomy and Biotechnology, Yunnan Agricultural University, Kunming, 650201, China. wheat-quinoa@ynau.edu.cn.
Yunnan Agricultural University · CN

Funding

the Yunnan Expert Workstation 202205AF150001
6 · The paper itself

Abstract

backgroundQuinoa (Chenopodium quinoa Willd.) originates in high altitude areas, such as the Andes, and has some inherent characteristics of cold, drought, and salinity tolerance, but is sensitive to high temperature.

resultsTo gain insight into the response mechanism of quinoa to high temperature stress, we conducted an extensive targeted metabolomic study of two cultivars, Dianli-3101 and Dianli-3051, along with a combined transcriptome analysis. A total of 794 metabolites and 54,200 genes were detected, in which the genes related to photosynthesis were found down-regulated at high temperatures, and two metabolites, lipids and flavonoids, showed the largest changes in differential accumulation. Further analysis of the Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway and transcription factors revealed that quinoa inhibits photosynthesis at high temperatures, and the possible strategies being used for high temperature stress management are regulation of heat stress transcription factors (HSFs) to obtain heat tolerance, and regulation of purine metabolism to enhance stress signals for rapid response to high temperature stress. The tolerant genotype could have an enhanced response through lower purine levels. The induction of the stress response could be mediated by HSF transcription factors. The results of this study may provide theoretical references for understanding the response mechanism of quinoa to high temperature stress, and for screening potential high temperature tolerant target genes and high temperature tolerant strains.

conclusionsThese findings reveal the regulation of the transcription factor family HSF and the purinergic pathway in response to high temperature stress to improve quinoa varieties with high temperature tolerance.

Indexed as

Chenopodium quinoaSeedlingsGene Expression ProfilingTemperatureTranscription FactorsTranscriptomeTranscription FactorsMetabolomicsPurine metabolismQuinoaStress responseToleranceTranscriptomics

Identifiers

PMID37264351
PMCPMC10234003
OpenAlexW4379055034

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.