Evidence map›Paper›PMID 37264036›Full record

ArticleNature communications2023

Host transcriptomic plasticity and photosymbiotic fidelity underpin Pocillopora acclimatization across thermal regimes in the Pacific Ocean.

Eric J Armstrong, Julie Lê-Hoang, Quentin Carradec, Jean-Marc Aury, Benjamin Noel, Benjamin C C Hume, Christian R Voolstra, Julie Poulain, Caroline Belser, David A Paz-García and 31 more

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
4.7field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 19 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

41 authors at 13 institutions in 9 countries.

Eric J Armstrong *Génomique Métabolique, Genoscope, Institut François Jacob, CEA, CNRS, Univ Evry, Université Paris-Saclay, 91057, Evry, France. armstrong@berkeley.edu.ORCID 0000-0003-1223-4907
Julie Lê-Hoang *Génomique Métabolique, Genoscope, Institut François Jacob, CEA, CNRS, Univ Evry, Université Paris-Saclay, 91057, Evry, France.
Quentin CarradecGénomique Métabolique, Genoscope, Institut François Jacob, CEA, CNRS, Univ Evry, Université Paris-Saclay, 91057, Evry, France. qcarrade@genoscope.cns.fr.ORCID 0000-0003-4612-8678
Jean-Marc AuryGénomique Métabolique, Genoscope, Institut François Jacob, CEA, CNRS, Univ Evry, Université Paris-Saclay, 91057, Evry, France.ORCID 0000-0003-1718-3010
Benjamin NoelGénomique Métabolique, Genoscope, Institut François Jacob, CEA, CNRS, Univ Evry, Université Paris-Saclay, 91057, Evry, France.ORCID 0000-0002-5830-3253
Benjamin C C HumeDepartment of Biology, University of Konstanz, 78457, Konstanz, Germany.ORCID 0000-0001-7753-3903
Christian R VoolstraDepartment of Biology, University of Konstanz, 78457, Konstanz, Germany.ORCID 0000-0003-4555-3795
Julie PoulainGénomique Métabolique, Genoscope, Institut François Jacob, CEA, CNRS, Univ Evry, Université Paris-Saclay, 91057, Evry, France.
Caroline BelserGénomique Métabolique, Genoscope, Institut François Jacob, CEA, CNRS, Univ Evry, Université Paris-Saclay, 91057, Evry, France.ORCID 0000-0002-8108-9910
David A Paz-GarcíaCentro de Investigaciones Biológicas del Noroeste (CIBNOR), Av. IPN 195, La Paz, Baja California Sur, 23096, México.ORCID 0000-0002-1228-5221
Corinne CruaudGenoscope, Institut François Jacob, CEA, Université Paris-Saclay, Evry, France.
Karine LabadieGenoscope, Institut François Jacob, CEA, Université Paris-Saclay, Evry, France.ORCID 0000-0001-7467-8509
Corinne Da SilvaGénomique Métabolique, Genoscope, Institut François Jacob, CEA, CNRS, Univ Evry, Université Paris-Saclay, 91057, Evry, France.
Clémentine MoulinFondation Tara Océan, Base Tara, 8 rue de Prague, 75 012, Paris, France.
Emilie BoissinPSL Université Paris: EPHE-UPVD-CNRS, UAR 3278 CRIOBE, Université de Perpignan, 52 Avenue Paul Alduy, 66860, Perpignan Cedex, France.ORCID 0000-0002-4110-790X
Guillaume BourdinSchool of Marine Sciences, University of Maine, Orono, 04469, ME, USA.ORCID 0000-0001-7608-5256
Guillaume IwankowPSL Université Paris: EPHE-UPVD-CNRS, UAR 3278 CRIOBE, Université de Perpignan, 52 Avenue Paul Alduy, 66860, Perpignan Cedex, France.
Sarah RomacResearch Federation for the study of Global Ocean Systems Ecology and Evolution, FR2022/ Tara Oceans-GOSEE, 3 rue Michel-Ange, 75016, Paris, France.ORCID 0000-0003-3785-6972
Sylvain AgostiniShimoda Marine Research Center, University of Tsukuba, 5-10-1, Shimoda, Shizuoka, Japan.ORCID 0000-0001-9040-9296
Bernard BanaigsPSL Université Paris: EPHE-UPVD-CNRS, UAR 3278 CRIOBE, Université de Perpignan, 52 Avenue Paul Alduy, 66860, Perpignan Cedex, France.
Emmanuel BossSchool of Marine Sciences, University of Maine, Orono, 04469, ME, USA.ORCID 0000-0002-8334-9595
Chris BowlerResearch Federation for the study of Global Ocean Systems Ecology and Evolution, FR2022/ Tara Oceans-GOSEE, 3 rue Michel-Ange, 75016, Paris, France.ORCID 0000-0003-3835-6187
Colomban de VargasResearch Federation for the study of Global Ocean Systems Ecology and Evolution, FR2022/ Tara Oceans-GOSEE, 3 rue Michel-Ange, 75016, Paris, France.
Eric DouvilleLaboratoire des Sciences du Climat et de l'Environnement, LSCE/IPSL, CEA-CNRS-UVSQ, Université Paris-Saclay, F-91191, Gif-sur-Yvette, France.ORCID 0000-0002-6673-1768
Michel FloresWeizmann Institute of Science, Department of Earth and Planetary Sciences, 76100, Rehovot, Israel.ORCID 0000-0003-3609-286X
Didier ForcioliUniversité Côte d'Azur, CNRS, INSERM, IRCAN, Medical School, Nice, France.ORCID 0000-0002-5505-0932
Paola FurlaUniversité Côte d'Azur, CNRS, INSERM, IRCAN, Medical School, Nice, France.ORCID 0000-0001-9899-942X
Pierre E GalandSorbonne Université, CNRS, Laboratoire d'Ecogéochimie des Environnements Benthiques (LECOB), Observatoire Océanologique de Banyuls, 66650, Banyuls sur mer, France.ORCID 0000-0002-2238-3247
Eric GilsonUniversité Côte d'Azur, CNRS, INSERM, IRCAN, Medical School, Nice, France.ORCID 0000-0001-5738-6723
Fabien LombardResearch Federation for the study of Global Ocean Systems Ecology and Evolution, FR2022/ Tara Oceans-GOSEE, 3 rue Michel-Ange, 75016, Paris, France.ORCID 0000-0002-8626-8782
Stéphane PesantEuropean Molecular Biology Laboratory, European Bioinformatics Institute, Wellcome Genome Campus, Hinxton, Cambridge, CB10 1SD, UK.
Stéphanie ReynaudLIA ROPSE, Laboratoire International Associé Université Côte d'Azur - Centre Scientifique de Monaco, Principality of Monaco, Monaco.ORCID 0000-0001-9975-6075
Matthew B SullivanDepartments of Microbiology and Civil, Environmental and Geodetic Engineering, Ohio State University, Columbus, OH, 43210, USA.ORCID 0000-0001-8398-8234
Shinichi SunagawaInstitute of Microbiology, Department of Biology, Vladimir-Prelog-Weg 4, 8093, Zürich, Switzerland.ORCID 0000-0003-3065-0314
Olivier P ThomasSchool of Biological and Chemical Sciences, Ryan institute, University of Galway, University Road H91TK33, Galway, Ireland.
Romain TroubléFondation Tara Océan, Base Tara, 8 rue de Prague, 75 012, Paris, France.ORCID 0000-0002-8304-808X
Rebecca Vega ThurberOregon State University, Department of Microbiology, 220 Nash Hall, 97331, Corvallis, OR, USA.ORCID 0000-0003-3516-2061
Didier ZoccolaLIA ROPSE, Laboratoire International Associé Université Côte d'Azur - Centre Scientifique de Monaco, Principality of Monaco, Monaco.ORCID 0000-0002-1524-8098
Serge PlanesPSL Research University: EPHE-UPVD-CNRS, USR 3278 CRIOBE, Université de Perpignan, 66860, Perpignan Cedex, France.
Denis AllemandLIA ROPSE, Laboratoire International Associé Université Côte d'Azur - Centre Scientifique de Monaco, Principality of Monaco, Monaco.ORCID 0000-0002-3089-4290
Patrick WinckerGénomique Métabolique, Genoscope, Institut François Jacob, CEA, CNRS, Univ Evry, Université Paris-Saclay, 91057, Evry, France.ORCID 0000-0001-7562-3454
Centre National de la Recherche Scientifique · FRInternational University of Monaco · MCCommissariat à l'Énergie Atomique et aux Énergies Alternatives · FRUniversity of Konstanz · DEUniversity of Maine · USEuropean Bioinformatics Institute · GBInstituto Politécnico Nacional · MXOllscoil na Gaillimhe – University of Galway · IEOregon State University · USSorbonne Université · FRThe Ohio State University · USUniversity of Tsukuba · JPWeizmann Institute of Science · IL

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Heat waves are causing declines in coral reefs globally. Coral thermal responses depend on multiple, interacting drivers, such as past thermal exposure, endosymbiont community composition, and host genotype. This makes the understanding of their relative roles in adaptive and/or plastic responses crucial for anticipating impacts of future warming. Here, we extracted DNA and RNA from 102 Pocillopora colonies collected from 32 sites on 11 islands across the Pacific Ocean to characterize host-photosymbiont fidelity and to investigate patterns of gene expression across a historical thermal gradient. We report high host-photosymbiont fidelity and show that coral and microalgal gene expression respond to different drivers. Differences in photosymbiotic association had only weak impacts on host gene expression, which was more strongly correlated with the historical thermal environment, whereas, photosymbiont gene expression was largely determined by microalgal lineage. Overall, our results reveal a three-tiered strategy of thermal acclimatization in Pocillopora underpinned by host-photosymbiont specificity, host transcriptomic plasticity, and differential photosymbiotic association under extreme warming.

Indexed as

AnthozoaTranscriptomeAcclimatizationAnimalsCoral ReefsPacific Ocean

Identifiers

PMID37264036
PMCPMC10235041
OpenAlexW4379054817

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.