Evidence map›Paper›PMID 37260683›Full record

ArticleFrontiers in microbiology2023

Functional annotation of rhizospheric phageome of the wild plant species

Ruba A Ashy, Rewaa S Jalal, Hana S Sonbol, Mashael D Alqahtani, Fatmah O Sefrji, Sahar A Alshareef, Fatimah M Alshehrei, Haneen W Abuauf, Lina Baz, Manal A Tashkandi and 3 more

Open access · goldAbstract read
In one paragraph

Article in Frontiers in microbiology, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
6.8field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 17 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Review
  5. Metagenomic analysis of soil microbial communities associated with Poa alpigena Lindm in Haixin Mountain, Qinghai Lake.Brazilian journal of microbiology : [publication of the Brazilian Society for Microbiology] · 2024
    Article
  6. Article
  7. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 5 institutions in 1 country.

Ruba A AshyDepartment of Biology, College of Science, University of Jeddah, Jeddah, Saudi Arabia.
Rewaa S JalalDepartment of Biology, College of Science, University of Jeddah, Jeddah, Saudi Arabia.
Hana S SonbolDepartment of Biology, College of Sciences, Princess Nourah bint Abdulrahman University, Riyadh, Saudi Arabia.
Mashael D AlqahtaniDepartment of Biology, College of Sciences, Princess Nourah bint Abdulrahman University, Riyadh, Saudi Arabia.
Fatmah O SefrjiDepartment of Biology, College of Science, Taibah University, Al-Madinah Al-Munawwarah, Saudi Arabia.
Sahar A AlshareefDepartment of Biology, College of Science and Arts at Khulis, University of Jeddah, Jeddah, Saudi Arabia.
Fatimah M AlshehreiDepartment of Biology, Jumum College University, Umm Al-Qura University, Makkah, Saudi Arabia.
Haneen W AbuaufDepartment of Biology, Faculty of Applied Science, Umm Al-Qura University, Makkah, Saudi Arabia.
Lina BazDepartment of Biochemistry, Faculty of Science, King AbdulAziz University, Jeddah, Saudi Arabia.
Manal A TashkandiDepartment of Biochemistry, College of Science, University of Jeddah, Jeddah, Saudi Arabia.
Israa J HakeemDepartment of Biochemistry, College of Science, University of Jeddah, Jeddah, Saudi Arabia.
Mohammed Y RefaiDepartment of Biochemistry, College of Science, University of Jeddah, Jeddah, Saudi Arabia.
Aala A AbulfarajBiological Sciences Department, College of Science & Arts, King AbdulAziz University, Rabigh, Saudi Arabia.
University of Jeddah · SAKing Abdulaziz University · SAPrincess Nourah bint Abdulrahman University · SAUmm al-Qura University · SATaibah University · SA

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Introduction: The study aims to describe phageome of soil rhizosphere of Methods: Genes of the rhizospheric virome of the wild plant species Results: Abundance of these genes was higher in the rhizospheric microbiome than in the bulk soil. Detected viral families include the plant viral family Potyviridae as well as the tailed bacteriophages of class Caudoviricetes that are mainly associated with bacterial genera Discussion: These ARGs can act synergistically to inhibit several antibiotics including tetracycline, penam, cephalosporin, rifamycins, aminocoumarin, and oleandomycin. The study highlighted the issue of horizontal transfer of ARGs to clinical isolates and human gut microbiome.

Indexed as

antibioticsARGCAZymecell membraneHGTKEGG

Identifiers

PMID37260683
PMCPMC10227523
OpenAlexW4376645870

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.