Evidence map›Paper›PMID 37260413›Full record

ArticleMicrobiology spectrum2023

Vibrio parahaemolyticus from Migratory Birds in China Carries an Extra Copy of tRNA-Gly and Plasmid-Mediated Quinolone Resistance Gene

Lin Zheng, Chao Yang, Ping Chen, Lingwei Zhu, Huiqi Wen, Mingwei Liu, Jiayao Guan, Gejin Lu, Jie Jing, Shiwen Sun and 6 more

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In one paragraph

Article in Microbiology spectrum, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
2.4field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 8 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

16 authors at 4 institutions in 1 country.

Lin Zheng *Changchun Veterinary Research Institute, Chinese Academy of Agricultural Sciences/Key laboratory of Jilin Province for Zoonosis Prevention and Control, Changchun, China.ORCID 0000-0002-6865-4786
Chao Yang *State Key Laboratory of Pathogen and Biosecurity, Beijing Institute of Microbiology and Epidemiology, Beijing, China.
Ping ChenSchool of Food and Engineering, Jilin Agricultural University, Changchun, China.
Lingwei ZhuChangchun Veterinary Research Institute, Chinese Academy of Agricultural Sciences/Key laboratory of Jilin Province for Zoonosis Prevention and Control, Changchun, China.
Huiqi WenState Key Laboratory of Pathogen and Biosecurity, Beijing Institute of Microbiology and Epidemiology, Beijing, China.
Mingwei LiuChangchun Veterinary Research Institute, Chinese Academy of Agricultural Sciences/Key laboratory of Jilin Province for Zoonosis Prevention and Control, Changchun, China.
Jiayao GuanChangchun Veterinary Research Institute, Chinese Academy of Agricultural Sciences/Key laboratory of Jilin Province for Zoonosis Prevention and Control, Changchun, China.
Gejin LuChangchun Veterinary Research Institute, Chinese Academy of Agricultural Sciences/Key laboratory of Jilin Province for Zoonosis Prevention and Control, Changchun, China.
Jie JingChangchun Veterinary Research Institute, Chinese Academy of Agricultural Sciences/Key laboratory of Jilin Province for Zoonosis Prevention and Control, Changchun, China.
Shiwen SunChangchun Veterinary Research Institute, Chinese Academy of Agricultural Sciences/Key laboratory of Jilin Province for Zoonosis Prevention and Control, Changchun, China.
Ying WangChangchun Veterinary Research Institute, Chinese Academy of Agricultural Sciences/Key laboratory of Jilin Province for Zoonosis Prevention and Control, Changchun, China.
Yajun SongState Key Laboratory of Pathogen and Biosecurity, Beijing Institute of Microbiology and Epidemiology, Beijing, China.
Ruifu YangState Key Laboratory of Pathogen and Biosecurity, Beijing Institute of Microbiology and Epidemiology, Beijing, China.
Xianglilan ZhangState Key Laboratory of Pathogen and Biosecurity, Beijing Institute of Microbiology and Epidemiology, Beijing, China.
Yujun CuiState Key Laboratory of Pathogen and Biosecurity, Beijing Institute of Microbiology and Epidemiology, Beijing, China.
Xuejun GuoChangchun Veterinary Research Institute, Chinese Academy of Agricultural Sciences/Key laboratory of Jilin Province for Zoonosis Prevention and Control, Changchun, China.ORCID 0000-0002-9437-0234
Chinese Academy of Agricultural Sciences · CNInstitute of Microbiology · CNChinese Academy of Sciences · CNJilin Agricultural University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Vibrio parahaemolyticus is a marine bacterium coming from estuarine environments, where the migratory birds can easily be colonized by V. parahaemolyticus. Migratory birds may be important reservoirs of V. parahaemolyticus by growth and re-entry into the environment. To further explore the spreading mechanism of V. parahaemolyticus among marine life, human beings, and migratory birds, we aimed to investigate the characteristics of the genetic diversity, antimicrobial resistance, virulence genes, and a potentially informative gene marker of V. parahaemolyticus isolated from migratory birds in China. This study recovered 124 (14.55%) V. parahaemolyticus isolates from 852 fecal and environmental (water) samples. All of the 124 strains were classified into 85 known sequence types (STs), of which ST-2738 was most frequently identified. Analysis of the population structure using whole-genome variation of the 124 isolates illustrated that they grouped into 27 different clonal groups (CGs) belonging to the previously defined geographical populations VppX and VppAsia. Even though these genomes have high diversity, an extra copy of tRNA-Gly was presented in all migratory bird-carried V. parahaemolyticus isolates, which could be used as a potentially informative marker of the V. parahaemolyticus strains derived from birds. Antibiotic sensitivity experiments revealed that 47 (37.10%) isolates were resistant to ampicillin. Five isolates harbored the plasmid-mediated quinolone resistance (PMQR) gene

Indexed as

QuinolonesVibrio InfectionsVibrio parahaemolyticusAmpicillinAnti-Bacterial AgentsHumansPlasmidsAmpicillinAnti-Bacterial AgentsQuinolonesantimicrobial resistancebacterial genome-wide association studiesgenomic analysisMLSTpopulation structureVibrio parahaemolyticusvirulence factors

Identifiers

PMID37260413
PMCPMC10433854
OpenAlexW4378952679

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.