Evidence map›Paper›PMID 37260411›Full record

ArticleMicrobiology spectrum2023

Bidirectional Mediation Effects between Intratumoral Microbiome and Host DNA Methylation Changes Contribute to Stomach Adenocarcinoma.

Kaile Yue, Dashuang Sheng, Xinxin Xue, Lanlan Zhao, Guoping Zhao, Chuandi Jin, Lei Zhang

Open access · goldAbstract read
In one paragraph

Article in Microbiology spectrum, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 24 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
24citing papers in PubMed, 1 pooled it
3.8field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

24 citing papers in PubMed, 1 synthesis or guideline pooled it, 25 citations in OpenAlex.

  1. Pooled it
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  7. The emerging role of non-Gastroenterology report · 2026
    Review
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  9. Review
  10. Article
  11. Article
  12. Altered Bacteria Abundance Is Associated With Outcomes in Head and Neck Squamous Cell Carcinoma.Otolaryngology--head and neck surgery : official journal of American Academy of Otolaryngology-Head and Neck Surgery · 2025
    Article
  13. Review
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  15. Regulation of RNA methylation linked to drug resistance in gastric cancer.Frontiers in cell and developmental biology · 2025
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 1 institution in 1 country.

Kaile Yue *Microbiome-X, National Institute of Health Data Science of China, Shandong University, Jinan, China.
Dashuang Sheng *Microbiome-X, National Institute of Health Data Science of China, Shandong University, Jinan, China.
Xinxin Xue *Microbiome-X, National Institute of Health Data Science of China, Shandong University, Jinan, China.
Lanlan ZhaoMicrobiome-X, National Institute of Health Data Science of China, Shandong University, Jinan, China.
Guoping ZhaoMicrobiome-X, National Institute of Health Data Science of China, Shandong University, Jinan, China.
Chuandi JinMicrobiome-X, National Institute of Health Data Science of China, Shandong University, Jinan, China.
Lei ZhangMicrobiome-X, National Institute of Health Data Science of China, Shandong University, Jinan, China.ORCID 0000-0003-4284-2604
Shandong University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The induction of aberrant DNA methylation is the major pathway by which Helicobacter pylori infection induces stomach adenocarcinoma (STAD). The involvement of the non-H. pylori gastric microbiota in this mechanism remains to be examined. RNA sequencing data, clinical information, and DNA methylation data were obtained from The Cancer Genome Atlas (TCGA) STAD project. The Kraken 2 pipeline was employed to explore the microbiome profiles. The microbiome was associated with occurrence, distal metastasis, and prognosis, and differential methylation changes related to distal metastasis and prognosis were analyzed. Bi-directional mediation effects of the intratumoral microbiome and host DNA methylation changes on the metastasis and prognosis of STAD were identified by mediation analysis. The expression of the

Indexed as

AdenocarcinomaHelicobacter InfectionsHelicobacter pyloriMicrobiotaStomach NeoplasmsDNA MethylationHumansTumor MicroenvironmentDNA methylationgastrointestinal microbiomehost-microbe interactionsstomach cancertumor microenvironment

Identifiers

PMID37260411
PMCPMC10434028
OpenAlexW4378952239

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.