Evidence map›Paper›PMID 37260237›Full record

ReviewmBio2023

Regionalization of the antiviral response in the gastrointestinal tract to provide spatially controlled host/pathogen interactions.

Megan L Stanifer, Stephanie M Karst, Steeve Boulant

Open access · goldAbstract readReview
In one paragraph

Review in mBio, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
0.8field-weighted citation impact, top 30% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 4 citations in OpenAlex.

  1. Review
  2. Article
  3. Review
  4. Review
  5. A single mutation in an enteric virus alters tropism and sensitivity to microbiota.Proceedings of the National Academy of Sciences of the United States of America · 2025
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Megan L StaniferDepartment of Molecular Genetics and Microbiology, College of Medicine, University of Florida , Gainesville, Florida, USA.
Stephanie M KarstDepartment of Molecular Genetics and Microbiology, College of Medicine, University of Florida , Gainesville, Florida, USA.
Steeve BoulantDepartment of Molecular Genetics and Microbiology, College of Medicine, University of Florida , Gainesville, Florida, USA.ORCID 0000-0001-8614-4993
University of Florida · US

Funding

Elucidation of Pathogenic Mechanisms underlying Norovirus DiarrheaR01AI162970 · NIAID · UNIVERSITY OF FLORIDA · PI KARST, STEPHANIE M · 2021 to 2025
$3.0M
Suppression of Enteric Norovirus Infection by Microbiota-Regulated Bile AcidsR01AI141478 · NIAID · UNIVERSITY OF FLORIDA · PI KARST, STEPHANIE M · 2019 to 2023
$2.7M
National Institute of Allergy and Infectious Diseases NIH NIAID R01AI141478National Institute of Allergy and Infectious Diseases NIH NIAID R01AI162970
6 · The paper itself

Abstract

As the largest mucosal surface, the gastrointestinal (GI) tract plays a key role in protecting the host against pathogen infections. It is a first line of defense against enteric viruses and must act to control infection while remaining tolerant to the high commensal bacteria load found within the GI tract. The GI tract can be divided into six main sections (stomach, duodenum, jejunum, ileum, colon, and rectum), and enteric pathogens have evolved to infect distinct parts of the GI tract. The intestinal epithelial cells (IECs) lining the GI tract are immune competent and can counteract these infections through their intrinsic immune response. Type I and type III interferons (IFNs) are antiviral cytokines that play a key role in protecting IECs against viruses with the type III IFN being the most important. Recent work has shown that IECs derived from the different sections of the GI tract display a unique expression of pattern recognition receptors used to fight pathogen infections. Additionally, it was also shown that these cells show a section-specific response to enteric viruses. This mini-review will discuss the molecular strategies used by IECs to detect and combat enteric viruses highlighting the differences existing along the entero-caudal axis of the GI tract. We will provide a perspective on how these spatially controlled mechanisms may influence virus tropism and discuss how the intestinal micro-environment may further shape the response of IECs to virus infections.

Indexed as

Gastrointestinal TractHost-Pathogen InteractionsAntiviral AgentsCytokinesEpithelial CellsInterferon LambdaAntiviral AgentsCytokinesInterferon Lambdacompartmentalized immune responseenteric virusesinterferonintestinal epithelial cellspattern recognition receptors

Identifiers

PMID37260237
PMCPMC10470817
OpenAlexW4378952506

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.