Evidence map›Paper›PMID 37259030›Full record

ArticleBMC genomics2023

Effect of miR-149-5p on intramuscular fat deposition in pigs based on metabolomics and transcriptomics.

Yingke Liu, Yilin Wei, Yaqing Dou, Chenlei Li, Chenglei Song, Zhe Zhang, Kunlong Qi, Xinjian Li, Ruimin Qiao, Kejun Wang and 3 more

Open access · goldAbstract read
In one paragraph

Article in BMC genomics, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
2.9field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 10 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 1 institution in 1 country.

Yingke LiuCollege of Animal Science and Technology, Henan Agricultural University, Zhengzhou, 450046, China.
Yilin WeiCollege of Animal Science and Technology, Henan Agricultural University, Zhengzhou, 450046, China.
Yaqing DouCollege of Animal Science and Technology, Henan Agricultural University, Zhengzhou, 450046, China.
Chenlei LiCollege of Animal Science and Technology, Henan Agricultural University, Zhengzhou, 450046, China.
Chenglei SongCollege of Animal Science and Technology, Henan Agricultural University, Zhengzhou, 450046, China.
Zhe ZhangCollege of Animal Science and Technology, Henan Agricultural University, Zhengzhou, 450046, China.
Kunlong QiCollege of Animal Science and Technology, Henan Agricultural University, Zhengzhou, 450046, China.
Xinjian LiCollege of Animal Science and Technology, Henan Agricultural University, Zhengzhou, 450046, China.
Ruimin QiaoCollege of Animal Science and Technology, Henan Agricultural University, Zhengzhou, 450046, China.
Kejun WangCollege of Animal Science and Technology, Henan Agricultural University, Zhengzhou, 450046, China.
Xiuling LiCollege of Animal Science and Technology, Henan Agricultural University, Zhengzhou, 450046, China.
Feng YangCollege of Animal Science and Technology, Henan Agricultural University, Zhengzhou, 450046, China.
Xuelei HanCollege of Animal Science and Technology, Henan Agricultural University, Zhengzhou, 450046, China. hxl014@126.com.
Henan Agricultural University · CN

Funding

Agricultural Breeds Research Project of Henan Province 2022020101the 14th Five-Year National Key R&D Program 2021YFD1301202
6 · The paper itself

Abstract

As one of the important traits in pig production, meat quality has important research significance and value. Intramuscular fat (IMF) content is one of the most important factors affecting pork quality. Many experimental studies have shown that IMF content is closely related to the flavor, tenderness, and juiciness of pork. Therefore, it is of great significance to study the mechanism of porcine IMF deposition. Previous research indicated that miR-149-5p promoted the proliferation of porcine intramuscular (IM) preadipocytes and decreased their ability to differentiate, albeit the exact mechanism of action is unknown. In vitro, foreign pigs showed increased miR-149-5p expression and reduced fat deposition when compared to Queshan Black pigs. This study conducted metabolomics and transcriptomics analyses of porcine IM preadipocytes overexpressing miR-149-5p to verify their effects on lipid formation. According to metabolomics analysis, the overexpression of miR-149-5p has significantly altered the lipid, organic acid, and organic oxygen metabolites of porcine IM preadipocytes. Specially speaking, it has changed 115 metabolites, including 105 up-regulated and 10 down-regulated ones, as well as the composition of lipid, organic acid, and organic oxygen metabolism-related metabolites. RNA-seq analysis showed that overexpression of miR-149-5p significantly altered 857 genes, of which 442 were up-regulated, and 415 were down-regulated, with enrichment to MAPK, IL-17, PI3K-Akt, and ErbB signaling pathways. We found that overexpression of miR-149-5p inhibited adipogenic differentiation by changing cAMP signaling pathway in porcine IM preadipocytes. In addition, the overexpression of miR-149-5p may affect the transport of Cu

Indexed as

AdipocytesMicroRNAsAdipogenesisAnimalsCell DifferentiationLipidsPhosphatidylinositol 3-KinasesSwineTranscriptomeLipidsMicroRNAsPhosphatidylinositol 3-KinasesATP7AMetabolomicsmiR-149-5pPorcine intramuscular preadipocytesTranscriptomics

Identifiers

PMID37259030
PMCPMC10230699
OpenAlexW4378903733

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.