Evidence map›Paper›PMID 37259026›Full record

ArticleBMC nephrology2023

A risk signature of ubiquitin-specific protease family predict the prognosis and therapy of kidney cancer patients.

Renjie Wang, Yang Liu, Jingxian Li, Yubao Zhao, Rui An, Zhifang Ma

Open access · goldAbstract read
In one paragraph

Article in BMC nephrology, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
0.9field-weighted citation impact, top 21% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 4 citations in OpenAlex.

  1. Review
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 4 institutions in 1 country.

Renjie WangDepartment of Urology, Sixth Hospital of Shanxi Medical University, General Hospital of Tisco, Taiyuan, China.
Yang LiuThe Second Hospital of Tianjin Medical University, Tianjin, China.
Jingxian LiThe Second Hospital of Tianjin Medical University, Tianjin, China.
Yubao ZhaoDepartment of Urology, Sixth Hospital of Shanxi Medical University, General Hospital of Tisco, Taiyuan, China.
Rui AnDepartment of Urology, Sixth Hospital of Shanxi Medical University, General Hospital of Tisco, Taiyuan, China.
Zhifang MaDepartment of Urology, First Hospital of Shanxi Medical University, Taiyuan, China. mazf_20141008@163.com.
Second Hospital of Shanxi Medical University · CNFirst Hospital of Shanxi Medical University · CNSecond Hospital of Tianjin Medical University · CNTianjin Medical University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Ubiquitin-specific proteases (USPs) are closely related to protein fate and cellular processes through various molecular signalling pathways, including DNA damage repair, p53, and transforming growth factor-β (TGF-β) pathways. In recent years, increasing evidence has revealed the pivotal role of ubiquitination in tumorigenesis of KIRC. However, USPs' molecular mechanism and clinical relevance in kidney cancer still need further exploration. Our study first determined prognosis-related ubiquitin-specific proteases (PRUSPs) in KIRC. We found these genes co-expressed with each other and might regulate different substrates. Based on the USPs' expression, the PRUSPs risk signature was constructed to predict the survival probability of KIRC patients. The patients in high-PRUSPs-risk group showed a low survival rate. ROC and calibration curve indicated a discriminate capacity of the signature, and uni-/multi-variate Cox regression analysis revealed that the PRUSPs score is an independent prognostic factor. In different KIRC clinical subgroups and external validation cohorts (including E-MTAB-1980 and TCGA-KIRP cohorts), the PRUSPs risk signature showed strong robustness and practicability. Further analysis found that high-risk group showed activation of immune-related pathways and high PD-1/CTLA4 expression, revealing that high-risk patients might be sensitive to immunotherapy. In summary, we constructed the USPs risk signature to predict kidney cancer prognosis, which provided the theoretical foundation for further clinical or pre-clinical experiments.

Indexed as

Carcinoma, Renal CellKidney NeoplasmsHumansImmunotherapyKidneyPrognosisKidney cancerPrognostic predictionTargeted therapyUSPs

Identifiers

PMID37259026
PMCPMC10230779
OpenAlexW4378806276

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.