Evidence map›Paper›PMID 37256947›Full record

ArticleScience advances2023

Cryo-EM visualization of DNA-PKcs structural intermediates in NHEJ.

Siyu Chen, Alex Vogt, Linda Lee, Tasmin Naila, Ryan McKeown, Alan E Tomkinson, Susan P Lees-Miller, Yuan He

Open access · goldAbstract read
In one paragraph

Article in Science advances, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed
4.3field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed, 28 citations in OpenAlex.

  1. Core NHEJ Factors Maintain Synapsis Across Diverse DNA End Structures.bioRxiv : the preprint server for biology · 2026
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 2 countries.

Siyu ChenDepartment of Molecular Biosciences, Northwestern University, Evanston, IL, USA.ORCID 0000-0003-4565-4772
Alex VogtDepartment of Molecular Biosciences, Northwestern University, Evanston, IL, USA.ORCID 0000-0001-7370-4699
Linda LeeDepartment of Biochemistry and Molecular Biology, Robson DNA Science Centre and Arnie Charbonneau Cancer Institute, University of Calgary, Calgary, Alberta T2N 4N1, Canada.ORCID 0000-0002-4744-7243
Tasmin NailaDepartment of Internal Medicine and Molecular Genetics and Microbiology and the University of New Mexico Comprehensive Cancer Center, University of New Mexico, Albuquerque, NM, USA.ORCID 0000-0002-9473-355X
Ryan McKeownDepartment of Molecular Biosciences, Northwestern University, Evanston, IL, USA.ORCID 0000-0003-3570-2494
Alan E TomkinsonDepartment of Internal Medicine and Molecular Genetics and Microbiology and the University of New Mexico Comprehensive Cancer Center, University of New Mexico, Albuquerque, NM, USA.
Susan P Lees-MillerDepartment of Biochemistry and Molecular Biology, Robson DNA Science Centre and Arnie Charbonneau Cancer Institute, University of Calgary, Calgary, Alberta T2N 4N1, Canada.ORCID 0000-0001-5809-2516
Yuan HeDepartment of Molecular Biosciences, Northwestern University, Evanston, IL, USA.ORCID 0000-0002-1455-3963
Northwestern University · USNew Mexico Cancer Center · USUniversity of Calgary · CA

Funding

Tumor Environment and Metastasis (TEAM) Research ProgramP30CA060553 · NCI · NORTHWESTERN UNIVERSITY AT CHICAGO · PI LEONIDAS C. PLATANIAS · 1993 to 2026
$153.9M
Transcription-Coupled & Replication-Associated Excision RepairP01CA092584 · NCI · UNIVERSITY OF CALIF-LAWRENC BERKELEY LAB · PI WALTER J. CHAZIN · 2001 to 2026
$89.6M
WOMEN'S CANCERS RESEARCH PROGRAMP30CA118100 · NCI · UNIVERSITY OF NEW MEXICO HEALTH SCIS CTR · PI Yolanda Sanchez · 2005 to 2026
$57.1M
Pacific Northwest Center for Cryo-EM - Screening supplementU24GM129547 · NIGMS · OREGON HEALTH & SCIENCE UNIVERSITY · PI EVANS, JAMES E, GOUAUX, JAMES E · 2018 to 2023
$54.8M
CELLULAR FUNCTIONS OF EUKARYOTIC LIGASESR01GM047251 · NIGMS · UNIVERSITY OF TEXAS HLTH SCI CTR SAN ANT · PI DAVIS, ANTHONY J, TOMKINSON, ALAN E · 1998 to 2021
$4.7M
Molecular Biophysics Training Program at Northwestern UniversityT32GM008382 · NIGMS · NORTHWESTERN UNIVERSITY · PI RADHAKRISHNAN, ISHWAR · 1990 to 2020
$4.3M
Molecular Biophysics Training Program at Northwestern UniversityT32GM140995 · NIGMS · NORTHWESTERN UNIVERSITY · PI Heather Wendy Pinkett, Reza Vafabakhsh · 2021 to 2026
$2.5M
Structure and Mechanism of Non-Homologous End JoiningR01GM135651 · NIGMS · NORTHWESTERN UNIVERSITY · PI HE, YUAN · 2020 to 2024
$1.8M
Structure and Mechanism of Eukaryotic Transcription RegulationR01GM144559 · NIGMS · NORTHWESTERN UNIVERSITY · PI HE, YUAN · 2022 to 2025
$1.4M
NCI NIH HHS P01 CA092584NCI NIH HHS P30 CA060553NCI NIH HHS P30 CA118100NIGMS NIH HHS R01 GM047251NIGMS NIH HHS R01 GM135651NIGMS NIH HHS R01 GM144559NIGMS NIH HHS T32 GM008382NIGMS NIH HHS T32 GM140995NIGMS NIH HHS U24 GM129547
6 · The paper itself

Abstract

DNA double-strand breaks (DSBs), one of the most cytotoxic forms of DNA damage, can be repaired by the tightly regulated nonhomologous end joining (NHEJ) machinery (Stinson and Loparo and Zhao

Indexed as

DNA-Activated Protein KinaseDNA End-Joining RepairCryoelectron MicroscopyDNADNA Breaks, Double-StrandedDNADNA-Activated Protein Kinase

Identifiers

PMID37256947
PMCPMC10413680
OpenAlexW4378894923

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.