Evidence map›Paper›PMID 37255207›Full record

ReviewJournal of evolutionary biology2023

Understanding the evolution of immune genes in jawed vertebrates.

Michal Vinkler, Steven R Fiddaman, Martin Těšický, Emily A O'Connor, Anna E Savage, Tobias L Lenz, Adrian L Smith, Jim Kaufman, Daniel I Bolnick, Charli S Davies and 14 more

Open access · hybridAbstract readReview
In one paragraph

Review in Journal of evolutionary biology, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 28 papers.

0numbers the graph read from it
0cells of the map it votes in
28citing papers in PubMed
7.2field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

28 citing papers in PubMed, 44 citations in OpenAlex.

  1. Article
  2. An ancient evolutionary origin for IL-1 cytokines.Nature ecology & evolution · 2026
    Article
  3. Rapidly evolving aphid gall effector proteins exhibit saposin-like folds.Proceedings of the National Academy of Sciences of the United States of America · 2026
    Article
  4. Review
  5. Article
  6. Article
  7. Rapidly evolving aphid gall effector proteins exhibit saposin-like folds.bioRxiv : the preprint server for biology · 2026
    Article
  8. Article
  9. Article
  10. PervasivebioRxiv : the preprint server for biology · 2025
    Article
  11. Article
  12. Article
  13. Differential Binding of ΔFN3 Proteins ofInternational journal of molecular sciences · 2025
    Article
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  16. Article
  17. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

24 authors at 17 institutions in 8 countries.

Michal VinklerDepartment of Zoology, Faculty of Science, Charles University, Prague, Czech Republic.ORCID 0000-0003-3572-9494
Steven R FiddamanDepartment of Biology, University of Oxford, Oxford, UK.ORCID 0000-0001-8222-7687
Martin TěšickýDepartment of Zoology, Faculty of Science, Charles University, Prague, Czech Republic.ORCID 0000-0001-8097-5331
Emily A O'ConnorDepartment of Biology, Lund University, Lund, Sweden.ORCID 0000-0001-8702-773X
Anna E SavageDepartment of Biology, University of Central Florida, Florida, Orlando, USA.ORCID 0000-0002-4917-8358
Tobias L LenzResearch Unit for Evolutionary Immunogenomics, Department of Biology, University of Hamburg, Hamburg, Germany.ORCID 0000-0002-7203-0044
Adrian L SmithDepartment of Biology, University of Oxford, Oxford, UK.ORCID 0000-0002-7657-6191
Jim KaufmanInstitute for Immunology and Infection Research, University of Edinburgh, Edinburgh, UK.ORCID 0000-0002-7216-8422
Daniel I BolnickDepartment of Ecology and Evolutionary Biology, University of Connecticut, Storrs, Connecticut, USA.ORCID 0000-0003-3148-6296
Charli S DaviesSchool of Biological Sciences, University of East Anglia, Norwich, UK.ORCID 0000-0001-9030-7820
Neira DedićDepartment of Botany and Zoology, Masaryk University, Brno, Czech Republic.ORCID 0000-0002-8674-6203
Andrew S FliesMenzies Institute for Medical Research, University of Tasmania, Hobart, Tasmania, Australia.ORCID 0000-0002-4550-1859
M Mercedes Gómez SamblásDepartment of Zoology, Faculty of Science, Charles University, Prague, Czech Republic.ORCID 0000-0003-4801-528X
Amberleigh E HenschenDepartment of Biological Sciences, University of Memphis, Memphis, Tennessee, USA.ORCID 0000-0002-6288-5575
Karel NovákDepartment of Genetics and Breeding, Institute of Animal Science, Prague, Uhříněves, Czech Republic.ORCID 0000-0002-9366-3764
Gemma PalomarFaculty of Biology, Institute of Environmental Sciences, Jagiellonian University, Kraków, Poland.ORCID 0000-0002-0659-8766
Nynke RavenDepartment of Science, Engineering and Build Environment, Deakin University, Victoria, Waurn Ponds, Australia.ORCID 0000-0001-8039-1264
Kalifa SamakéDepartment of Genetics and Microbiology, Faculty of Science, Charles University, Prague, Czech Republic.ORCID 0009-0008-0972-6373
Joel SladeDepartment of Biology, California State University, Fresno, California, USA.ORCID 0000-0002-4587-5033
Nithya Kuttiyarthu VeetilDepartment of Zoology, Faculty of Science, Charles University, Prague, Czech Republic.ORCID 0000-0002-1202-4902
Eleni VoukaliDepartment of Zoology, Faculty of Science, Charles University, Prague, Czech Republic.ORCID 0000-0001-6029-6171
Jacob HöglundDepartment of Ecology and Genetics, Uppsala Universitet, Uppsala, Sweden.ORCID 0000-0002-5840-779X
David S RichardsonSchool of Biological Sciences, University of East Anglia, Norwich, UK.ORCID 0000-0001-7226-9074
Helena WesterdahlDepartment of Biology, Lund University, Lund, Sweden.ORCID 0000-0001-7167-9805
Charles University · CZLund University · SEUniversity of East Anglia · GBUniversity of Oxford · GBCalifornia State University, Fresno · USDeakin University · AUInstitute of Animal Science · CZJagiellonian University · PLMasaryk University · CZUniversidad de Granada · ESUniversität Hamburg · DEUniversity of Cambridge · GBUniversity of Central Florida · USUniversity of Connecticut · USUniversity of Memphis · USUniversity of Tasmania · AUUppsala University · SE

Funding

Reciprocal genetics of recently-evolved vertebrate immunity and peritoneal helminth counter-adaptationR01AI123659 · NIAID · UNIVERSITY OF TEXAS AT AUSTIN · PI Daniel Imara Bolnick · 2017 to 2026
$3.8M
Biotechnology and Biological Sciences Research Council BB/K004468/1Biotechnology and Biological Sciences Research Council BB/M011224/1Biotechnology and Biological Sciences Research Council BB/N023803/1Biotechnology and Biological Sciences Research Council BB/V000756/1NIAID NIH HHS R01 AI123659
6 · The paper itself

Abstract

Driven by co-evolution with pathogens, host immunity continuously adapts to optimize defence against pathogens within a given environment. Recent advances in genetics, genomics and transcriptomics have enabled a more detailed investigation into how immunogenetic variation shapes the diversity of immune responses seen across domestic and wild animal species. However, a deeper understanding of the diverse molecular mechanisms that shape immunity within and among species is still needed to gain insight into-and generate evolutionary hypotheses on-the ultimate drivers of immunological differences. Here, we discuss current advances in our understanding of molecular evolution underpinning jawed vertebrate immunity. First, we introduce the immunome concept, a framework for characterizing genes involved in immune defence from a comparative perspective, then we outline how immune genes of interest can be identified. Second, we focus on how different selection modes are observed acting across groups of immune genes and propose hypotheses to explain these differences. We then provide an overview of the approaches used so far to study the evolutionary heterogeneity of immune genes on macro and microevolutionary scales. Finally, we discuss some of the current evidence as to how specific pathogens affect the evolution of different groups of immune genes. This review results from the collective discussion on the current key challenges in evolutionary immunology conducted at the ESEB 2021 Online Satellite Symposium: Molecular evolution of the vertebrate immune system, from the lab to natural populations.

Indexed as

Adaptive ImmunityBiological EvolutionAnimalsEvolution, MolecularImmunity, InnateVertebratesadaptationadaptive immunityevolutionary immunologygenomicshost-parasite interactionsimmunogeneticsinnate immunityMHCmolecular evolutionvertebrates

Identifiers

PMID37255207
PMCPMC10247546
OpenAlexW4378782198

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.