Evidence map›Paper›PMID 37254453›Full record

ArticleHematological oncology2023

Molecular classification and identification of an aggressive signature in low-grade B-cell lymphomas.

Melissa A Hopper, Kerstin Wenzl, Keenan T Hartert, Jordan E Krull, Abigail R Dropik, Joseph P Novak, Michelle K Manske, MaKayla R Serres, Vivekananda Sarangi, Melissa C Larson and 11 more

Open access · hybridAbstract read
In one paragraph

Article in Hematological oncology, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
1.3field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 5 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

21 authors at 4 institutions in 1 country.

Melissa A HopperDivision of Hematology, Mayo Clinic, Rochester, Minnesota, USA.ORCID https://orcid.org/0000-0003-0675-8253
Kerstin WenzlDivision of Hematology, Mayo Clinic, Rochester, Minnesota, USA.
Keenan T HartertDivision of Hematology, Mayo Clinic, Rochester, Minnesota, USA.
Jordan E KrullDivision of Hematology, Mayo Clinic, Rochester, Minnesota, USA.
Abigail R DropikDivision of Hematology, Mayo Clinic, Rochester, Minnesota, USA.
Joseph P NovakDepartment of Quantitative Health Sciences, Mayo Clinic, Rochester, Minnesota, USA.
Michelle K ManskeDivision of Hematology, Mayo Clinic, Rochester, Minnesota, USA.
MaKayla R SerresDivision of Hematology, Mayo Clinic, Rochester, Minnesota, USA.
Vivekananda SarangiDepartment of Quantitative Health Sciences, Mayo Clinic, Rochester, Minnesota, USA.
Melissa C LarsonDepartment of Quantitative Health Sciences, Mayo Clinic, Rochester, Minnesota, USA.
Matthew J MaurerDepartment of Quantitative Health Sciences, Mayo Clinic, Rochester, Minnesota, USA.
Zhi-Zhang YangDivision of Hematology, Mayo Clinic, Rochester, Minnesota, USA.
Jonas PaludoDivision of Hematology, Mayo Clinic, Rochester, Minnesota, USA.ORCID https://orcid.org/0000-0002-7350-5531
Ellen D McPhailDivision of Hematology, Mayo Clinic, Rochester, Minnesota, USA.ORCID https://orcid.org/0000-0001-6918-3376
Thomas M HabermannDivision of Hematology, Mayo Clinic, Rochester, Minnesota, USA.
Brian K LinkDivision of Hematology, Oncology, and Bone & Marrow Transplantation, University of Iowa, Iowa City, Iowa, USA.
Lisa M RimszaDepartment of Laboratory Medicine and Pathology, Mayo Clinic, Phoenix, Arizona, USA.
Stephen M AnsellDivision of Hematology, Mayo Clinic, Rochester, Minnesota, USA.
James R CerhanDepartment of Quantitative Health Sciences, Mayo Clinic, Rochester, Minnesota, USA.
Dragan JevremovicDepartment of Laboratory Medicine and Pathology, Mayo Clinic, Rochester, Minnesota, USA.
Anne J NovakDivision of Hematology, Mayo Clinic, Rochester, Minnesota, USA.
Mayo Clinic · USMayo Clinic in Florida · USUniversity of Iowa · USWinnMed · US

Funding

The Role of Monocytes in non-Hodgkin LymphomaP50CA097274 · NCI · UNIVERSITY OF IOWA · PI HOUTMAN, JON C.D. · 2002 to 2021
$45.7M
The Lymphoma Epidemiology of Outcomes (LEO) Cohort Study (Supplement)U01CA195568 · NCI · MAYO CLINIC ROCHESTER · PI CERHAN, JAMES R, FLOWERS, CHRISTOPHER R · 2015 to 2025
$22.1M
PHD TRAINING PROGRAM IN BASIC IMMUNOLOGYT32AI007425 · NIAID · MAYO CLINIC ROCHESTER · PI SHAPIRO, VIRGINIA SMITH · 1995 to 2020
$3.6M
Genetic Predictors of Early Clinical Failure in Diffuse Large B Cell LymphomaR01CA212162 · NCI · MAYO CLINIC ROCHESTER · PI CERHAN, JAMES R, NOVAK, ANNE JOSEPHINE · 2017 to 2021
$3.3M
Training Program in ImmunologyT32AI170478 · NIAID · MAYO CLINIC ROCHESTER · PI Virginia Smith Shapiro · 2022 to 2026
$1.4M
NCI NIH HHS P50 CA097274NCI NIH HHS R01 CA212162NCI NIH HHS R01 CA212162-01A1NCI NIH HHS SPORE-P50 CA97274NCI NIH HHS T32AI007425NCI NIH HHS T32AI170478NCI NIH HHS U01 CA195568NIAID NIH HHS T32 AI007425NIAID NIH HHS T32 AI170478
6 · The paper itself

Abstract

Non-follicular low-grade B-cell lymphomas (LGBCL) are biologically diverse entities that share clinical and histologic features that make definitive pathologic categorization challenging. While most patients with LGBCL have an indolent course, some experience aggressive disease, highlighting additional heterogeneity across these subtypes. To investigate the potential for shared biology across subtypes, we performed RNA sequencing and applied machine learning approaches that identified five clusters of patients that grouped independently of subtype. One cluster was characterized by inferior outcome, upregulation of cell cycle genes, and increased tumor immune cell content. Integration of whole exome sequencing identified novel LGBCL mutations and enrichment of TNFAIP3 and BCL2 alterations in the poor survival cluster. Building on this, we further refined a transcriptomic signature associated with early clinical failure in two independent cohorts. Taken together, this study identifies unique clusters of LGBCL defined by novel gene expression signatures and immune profiles associated with outcome across diagnostic subtypes.

Indexed as

Lymphoma, B-CellGene Expression ProfilingHumansTranscriptomegeneticsimmunelymphomasignaturestranscriptomics

Identifiers

PMID37254453
PMCPMC10592585
OpenAlexW4378781737

What OpenQuestion holds

Textmetadata
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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.