Evidence map›Paper›PMID 37253933›Full record

ArticleCommunications biology2023

Multigenic resistance to Xylella fastidiosa in wild grapes (Vitis sps.) and its implications within a changing climate.

Abraham Morales-Cruz, Jonas Aguirre-Liguori, Mélanie Massonnet, Andrea Minio, Mirella Zaccheo, Noe Cochetel, Andrew Walker, Summaira Riaz, Yongfeng Zhou, Dario Cantu and 1 more

Open access · goldAbstract read
In one paragraph

Article in Communications biology, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 22 papers.

0numbers the graph read from it
0cells of the map it votes in
22citing papers in PubMed
15.9field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

22 citing papers in PubMed, 38 citations in OpenAlex.

  1. Article
  2. The dynamics of introgression and parallel adaptation across North AmericanProceedings of the National Academy of Sciences of the United States of America · 2026
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  6. Review
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  8. Article
  9. Chemical Treatments Tested AgainstPathogens (Basel, Switzerland) · 2025
    Review
  10. Article
  11. Review
  12. The dynamics of wildHorticulture research · 2025
    Article
  13. Review
  14. Article
  15. Article
  16. Biography ofHorticulture research · 2024
    Article
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 5 institutions in 2 countries.

Abraham Morales-Cruz *U.S. Department of Energy, Joint Genome Institute, Lawrence Berkeley National Lab, Berkeley, CA, 94720, USA.ORCID 0000-0002-6122-2649
Jonas Aguirre-Liguori *Dept. of Ecology and Evolutionary Biology, University of California, Irvine, CA, USA.ORCID 0000-0003-1763-044X
Mélanie MassonnetDept. of Viticulture and Enology, University of California, Davis, CA, USA.
Andrea MinioDept. of Viticulture and Enology, University of California, Davis, CA, USA.
Mirella ZaccheoDept. of Viticulture and Enology, University of California, Davis, CA, USA.
Noe CochetelDept. of Viticulture and Enology, University of California, Davis, CA, USA.ORCID 0000-0003-3395-9536
Andrew WalkerDept. of Viticulture and Enology, University of California, Davis, CA, USA.
Summaira RiazSan Joaquin Valley Agricultural Center, United States Dept of Agriculture, Parlier, CA, USA.ORCID 0000-0001-7739-144X
Yongfeng ZhouAgricultural Genomics Institute at Shenzhen, Chinese Academy of Agricultural Sciences, Shenzhen, China. zhouyongfeng@caas.cn.ORCID 0000-0003-0780-2973
Dario CantuDept. of Viticulture and Enology, University of California, Davis, CA, USA. dacantu@ucdavis.edu.ORCID 0000-0002-4858-1508
Brandon S GautDept. of Ecology and Evolutionary Biology, University of California, Irvine, CA, USA. bgaut@uci.edu.ORCID 0000-0002-1334-5556
University of California, Davis · USUniversity of California, Irvine · USAgricultural Genomics Institute at Shenzhen · CNJoint Genome Institute · USSan Joaquin Valley Agricultural Sciences Center · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Xylella fastidiosa is a bacterium that infects crops like grapevines, coffee, almonds, citrus and olives. There is little understanding of the genes that contribute to plant resistance, the genomic architecture of resistance, and the potential role of climate in shaping resistance, in part because major crops like grapevines (Vitis vinifera) are not resistant to the bacterium. Here we study a wild grapevine species, V. arizonica, that segregates for resistance. Using genome-wide association, we identify candidate resistance genes. Resistance-associated kmers are shared with a sister species of V. arizonica but not with more distant species, suggesting that resistance evolved more than once. Finally, resistance is climate dependent, because individuals from low ( < 10 °C) temperature locations in the wettest quarter were typically susceptible to infection, likely reflecting a lack of pathogen pressure in colder climates. In fact, climate is as effective a predictor of resistance phenotypes as some genetic markers. We extend our climate observations to additional crops, predicting that increased pathogen pressure is more likely for grapevines and almonds than some other susceptible crops.

Indexed as

VitisXylellaClimate ChangeGenome-Wide Association Study

Identifiers

PMID37253933
PMCPMC10229667
OpenAlexW4378782506

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.