Evidence map›Paper›PMID 37253716›Full record

ArticleNature communications2023

Apicobasal RNA asymmetries regulate cell fate in the early mouse embryo.

Azelle Hawdon, Niall D Geoghegan, Monika Mohenska, Anja Elsenhans, Charles Ferguson, Jose M Polo, Robert G Parton, Jennifer Zenker

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
2.5field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 16 citations in OpenAlex.

  1. Subcellularly Resolved 3D Translatome in Mouse Oocytes and Early Embryos.bioRxiv : the preprint server for biology · 2026
    Article
  2. Article
  3. Article
  4. Imaging Spatiotemporal RNA and Protein Dynamics in Mouse Embryos.Methods in molecular biology (Clifton, N.J.) · 2026
    Article
  5. Article
  6. Article
  7. Article
  8. Landscape and regulation of mRNA translation in the earlybioRxiv : the preprint server for biology · 2025
    Article
  9. Review
  10. Article
  11. Localized translation in the embryo.Nature reviews. Molecular cell biology · 2024
    Article
  12. Article
  13. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 5 institutions in 2 countries.

Azelle HawdonAustralian Regenerative Medicine Institute, Monash University, Clayton, Victoria, Australia.ORCID 0000-0002-8935-0597
Niall D GeogheganWalter and Eliza Hall Institute of Medical Research, Department of Medical Biology, University of Melbourne, Melbourne, Victoria, Australia.ORCID 0000-0001-9884-0769
Monika MohenskaDepartment of Anatomy and Developmental Biology, Development and Stem Cells Program, Monash Biomedicine Discovery Institute, Clayton, VIC, 3800, Australia.
Anja ElsenhansDepartment of Biology, University of Duisburg-Essen, Essen, Germany.
Charles FergusonInstitute for Molecular Bioscience, University of Queensland, Brisbane, Queensland, Australia.
Jose M PoloAustralian Regenerative Medicine Institute, Monash University, Clayton, Victoria, Australia.ORCID 0000-0002-2531-778X
Robert G PartonInstitute for Molecular Bioscience, University of Queensland, Brisbane, Queensland, Australia.ORCID 0000-0002-7494-5248
Jennifer ZenkerAustralian Regenerative Medicine Institute, Monash University, Clayton, Victoria, Australia. Jennifer.Zenker@monash.edu.ORCID 0000-0002-9929-2909
Australian Regenerative Medicine Institute · AUThe University of Queensland · AUAustralian Institute of Business · AUThe University of Melbourne · AUUniversity of Duisburg-Essen · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The spatial sorting of RNA transcripts is fundamental for the refinement of gene expression to distinct subcellular regions. Although, in non-mammalian early embryogenesis, differential RNA localisation presages cell fate determination, in mammals it remains unclear. Here, we uncover apical-to-basal RNA asymmetries in outer blastomeres of 16-cell stage mouse preimplantation embryos. Basally directed RNA transport is facilitated in a microtubule- and lysosome-mediated manner. Yet, despite an increased accumulation of RNA transcripts in basal regions, higher translation activity occurs at the more dispersed apical RNA foci, demonstrated by spatial heterogeneities in RNA subtypes, RNA-organelle interactions and translation events. During the transition to the 32-cell stage, the biased inheritance of RNA transcripts, coupled with differential translation capacity, regulates cell fate allocation of trophectoderm and cells destined to form the pluripotent inner cell mass. Our study identifies a paradigm for the spatiotemporal regulation of post-transcriptional gene expression governing mammalian preimplantation embryogenesis and cell fate.

Indexed as

Embryo, MammalianRNAAnimalsBlastocystCell DifferentiationEmbryonic DevelopmentGene Expression Regulation, DevelopmentalMammalsMiceRNA

Identifiers

PMID37253716
PMCPMC10229589
OpenAlexW4378781145

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.