Evidence map›Paper›PMID 37253111›Full record

ArticleCancer immunology research2023

Immunogenetic Metabolomics Reveals Key Enzymes That Modulate CAR T-cell Metabolism and Function.

Paul Renauer, Jonathan J Park, Meizhu Bai, Arianny Acosta, Won-Ho Lee, Guang Han Lin, Yueqi Zhang, Xiaoyun Dai, Guangchuan Wang, Youssef Errami and 5 more

Abstract read
In one paragraph

Article in Cancer immunology research, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed.

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  9. Ginkgolic acid inhibits CD8Journal of pharmaceutical analysis · 2025
    Article
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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

15 authors.

Paul RenauerDepartment of Genetics, Yale University School of Medicine, New Haven, Connecticut.ORCID 0000-0002-8747-0552
Jonathan J ParkDepartment of Genetics, Yale University School of Medicine, New Haven, Connecticut.ORCID 0000-0001-5887-3953
Meizhu BaiDepartment of Genetics, Yale University School of Medicine, New Haven, Connecticut.ORCID 0000-0001-8208-4073
Arianny AcostaDepartment of Genetics, Yale University School of Medicine, New Haven, Connecticut.ORCID 0009-0008-7208-2419
Won-Ho LeeDepartment of Genetics, Yale University School of Medicine, New Haven, Connecticut.ORCID 0009-0000-5158-1202
Guang Han LinDepartment of Genetics, Yale University School of Medicine, New Haven, Connecticut.ORCID 0009-0001-1973-5897
Yueqi ZhangDepartment of Genetics, Yale University School of Medicine, New Haven, Connecticut.ORCID 0000-0002-3366-7966
Xiaoyun DaiDepartment of Genetics, Yale University School of Medicine, New Haven, Connecticut.ORCID 0000-0002-6162-5202
Guangchuan WangDepartment of Genetics, Yale University School of Medicine, New Haven, Connecticut.ORCID 0000-0001-5315-1599
Youssef ErramiDepartment of Genetics, Yale University School of Medicine, New Haven, Connecticut.ORCID 0000-0002-0432-4331
Terence WuWest Campus Analytical Core, Mass Spectrometry/Proteomics Facility, West Haven, Connecticut.ORCID 0000-0001-6378-2116
Paul ClarkDepartment of Genetics, Yale University School of Medicine, New Haven, Connecticut.ORCID 0009-0008-8399-5491
Lupeng YeDepartment of Genetics, Yale University School of Medicine, New Haven, Connecticut.ORCID 0000-0003-3901-6598
Quanjun YangDepartment of Genetics, Yale University School of Medicine, New Haven, Connecticut.ORCID 0000-0003-0279-8784
Sidi ChenDepartment of Genetics, Yale University School of Medicine, New Haven, Connecticut.ORCID 0000-0002-3819-5005

Funding

MEDICAL SCIENTIST TRAINING PROGRAMT32GM007205 · NIGMS · YALE UNIVERSITY · PI KAZMIERCZAK, BARBARA I · 1985 to 2019
$42.9M
PREDOCTORAL TRAINING PROGRAM IN GENETICST32GM007499 · NIGMS · YALE UNIVERSITY · PI CARLSON, JOHN R, REINKE, VALERIE J · 1985 to 2022
$13.9M
Systems analysis of phenotypic switch in control of cancer invasionU54CA209992 · NCI · YALE UNIVERSITY · PI LEVCHENKO, ANDRE · 2016 to 2021
$10.1M
(PQ4) Novel tools for in vivo study of genetic interactions in cancer progressionR01CA231112 · NCI · YALE UNIVERSITY · PI CHEN, SIDI · 2018 to 2022
$3.0M
High-throughput in vivo genetics for immunotherapy target discoveryDP2CA238295 · NCI · YALE UNIVERSITY · PI CHEN, SIDI · 2018 to 2018
$2.5M
New approaches for single cell tagging, editing and profiling of glial cells in vivoRF1DA048811 · NIDA · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI HONG, WEIZHE · 2019 to 2019
$2.4M
Rapidly scalable platforms for direct in vivo screening of functional drivers in lethal cancersR33CA225498 · NCI · YALE UNIVERSITY · PI CHEN, SIDI · 2019 to 2021
$1.2M
NCI NIH HHS DP2 CA238295NCI NIH HHS R01 CA231112NCI NIH HHS R33 CA225498NCI NIH HHS U54 CA209992NIDA NIH HHS RF1 DA048811NIGMS NIH HHS T32 GM007205NIGMS NIH HHS T32 GM007499
6 · The paper itself

Abstract

Immune evasion is a critical step of cancer progression that remains a major obstacle for current T cell-based immunotherapies. Hence, we investigated whether it is possible to genetically reprogram T cells to exploit a common tumor-intrinsic evasion mechanism whereby cancer cells suppress T-cell function by generating a metabolically unfavorable tumor microenvironment (TME). In an in silico screen, we identified ADA and PDK1 as metabolic regulators. We then showed that overexpression (OE) of these genes enhanced the cytolysis of CD19-specific chimeric antigen receptor (CAR) T cells against cognate leukemia cells, and conversely, ADA or PDK1 deficiency dampened this effect. ADA-OE in CAR T cells improved cancer cytolysis under high concentrations of adenosine, the ADA substrate, and an immunosuppressive metabolite in the TME. High-throughput transcriptomics and metabolomics analysis of these CAR T cells revealed alterations of global gene expression and metabolic signatures in both ADA- and PDK1-engineered CAR T cells. Functional and immunologic analyses demonstrated that ADA-OE increased proliferation and decreased exhaustion in CD19-specific and HER2-specific CAR T cells. ADA-OE improved tumor infiltration and clearance by HER2-specific CAR T cells in an in vivo colorectal cancer model. Collectively, these data unveil systematic knowledge of metabolic reprogramming directly in CAR T cells and reveal potential targets for improving CAR T-cell therapy.

Indexed as

NeoplasmsT-LymphocytesHumansImmunogeneticsImmunotherapy, AdoptiveMetabolomicsTumor Microenvironment

Identifiers

PMID37253111
PMCPMC10527769

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.