Evidence map›Paper›PMID 37252723›Full record

ArticleAnalytical chemistry2023

Improved Label-Free Quantification of Intact Proteoforms Using Field Asymmetric Ion Mobility Spectrometry.

Jake T Kline, Michael W Belford, Jingjing Huang, Joseph B Greer, David Bergen, Ryan T Fellers, Sylvester M Greer, David M Horn, Vlad Zabrouskov, Romain Huguet and 3 more

Abstract read
In one paragraph

Article in Analytical chemistry, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 1 synthesis or guideline pooled it.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors.

Jake T KlineDepartment of Biology, University of Oklahoma, Norman, Oklahoma 73019, United States.
Michael W BelfordThermo Fisher Scientific, San Jose, California 95134, United States.
Jingjing HuangThermo Fisher Scientific, San Jose, California 95134, United States.
Joseph B GreerProteinaceous, Inc., Evanston, Illinois 60208, United States.
David BergenThermo Fisher Scientific, San Jose, California 95134, United States.
Ryan T FellersProteinaceous, Inc., Evanston, Illinois 60208, United States.
Sylvester M GreerThermo Fisher Scientific, San Jose, California 95134, United States.
David M HornThermo Fisher Scientific, San Jose, California 95134, United States.
Vlad ZabrouskovThermo Fisher Scientific, San Jose, California 95134, United States.ORCID 0000-0003-3567-9407
Romain HuguetThermo Fisher Scientific, San Jose, California 95134, United States.
Cornelia L BoeserThermo Fisher Scientific, San Jose, California 95134, United States.
Kenneth R DurbinProteinaceous, Inc., Evanston, Illinois 60208, United States.ORCID 0000-0001-7163-4877
Luca FornelliDepartment of Biology, University of Oklahoma, Norman, Oklahoma 73019, United States.ORCID 0000-0001-6334-1046

Funding

A multi-level mass spectrometry pipeline for the analysis of whole proteoforms and their complexesR35GM147397 · NIGMS · UNIVERSITY OF OKLAHOMA · PI Luca Fornelli · 2022 to 2026
$1.9M
NIGMS NIH HHS R35 GM147397
6 · The paper itself

Abstract

The high-throughput quantification of intact proteoforms using a label-free approach is typically performed on proteins in the 0-30 kDa mass range extracted from whole cell or tissue lysates. Unfortunately, even when high-resolution separation of proteoforms is achieved by either high-performance liquid chromatography or capillary electrophoresis, the number of proteoforms that can be identified and quantified is inevitably limited by the inherent sample complexity. Here, we benchmark label-free quantification of proteoforms of

Indexed as

Ion Mobility SpectrometryTandem Mass SpectrometryChromatography, LiquidEscherichia coliProteinsProteomicsProteins

Identifiers

PMID37252723
PMCPMC11149911

What OpenQuestion holds

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LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.