Evidence map›Paper›PMID 37252058›Full record

ArticleMycoKeys2023

Mycobiont-specific primers facilitate the amplification of mitochondrial small subunit ribosomal DNA: a focus on the lichenized fungal genus

Maonian Xu, Yingkui Liu, Erik Möller, Scott LaGreca, Patricia Moya, Xinyu Wang, Einar Timdal, Hugo de Boer, Eva Barreno, Lisong Wang and 5 more

Open access · goldAbstract read
PubMed Full text at PMC Publisher
In one paragraph

Article in MycoKeys, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
0.6field-weighted citation impact, top 24% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 1 citations in OpenAlex.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors at 8 institutions in 6 countries.

Maonian XuFaculty of Pharmaceutical Sciences, University of Iceland, Hofsvallagata 53, IS-107 Reykjavik, Iceland.ORCID https://orcid.org/0000-0002-4346-8020
Yingkui LiuJiangsu Key Laboratory of Brain Disease Bioinformation, Research Center for Biochemistry & Molecular Biology, College of Life Sciences, Xuzhou Medical University, 209 Tongshan Road, Xuzhou, 221004, China.
Erik MöllerNatural History Museum, University of Oslo, NO-0318 Oslo, Norway.
Scott LaGrecaDepartment of Biology, Duke University, NC 27708-0338 Durham, USA.
Patricia MoyaInstituto Cavanilles de Biodiversidad y Biologia Evolutiva (ICBIBE), Dpto. Botánica, Facultat de Ciències Biològiques, Universitat de València, C/ Dr. Moliner 50, 46100-Burjassot, València, Spain.
Xinyu WangLaboratory for Plant Diversity and Biogeography of East Asia, Kunming Institute of Botany, Chinese Academy of Sciences, 650204 Kunming, China.ORCID https://orcid.org/0000-0003-2166-6111
Einar TimdalNatural History Museum, University of Oslo, NO-0318 Oslo, Norway.ORCID https://orcid.org/0000-0003-4524-0617
Hugo de BoerNatural History Museum, University of Oslo, NO-0318 Oslo, Norway.ORCID https://orcid.org/0000-0003-1985-7859
Eva BarrenoInstituto Cavanilles de Biodiversidad y Biologia Evolutiva (ICBIBE), Dpto. Botánica, Facultat de Ciències Biològiques, Universitat de València, C/ Dr. Moliner 50, 46100-Burjassot, València, Spain.
Lisong WangLaboratory for Plant Diversity and Biogeography of East Asia, Kunming Institute of Botany, Chinese Academy of Sciences, 650204 Kunming, China.
Holger ThüsBotany Department, State Museum of Natural History Stuttgart, D-70191 Stuttgart, Germany.ORCID https://orcid.org/0000-0002-8697-4572
Ólafur AndréssonFaculty of Pharmaceutical Sciences, University of Iceland, Hofsvallagata 53, IS-107 Reykjavik, Iceland.ORCID https://orcid.org/0000-0002-8451-5671
Kristinn Pétur MagnússonFaculty of Life and Environmental Sciences, University of Iceland, IS-102 Reykjavik, Iceland.ORCID https://orcid.org/0000-0003-4528-6826
Elín Soffia ÓlafsdóttirFaculty of Pharmaceutical Sciences, University of Iceland, Hofsvallagata 53, IS-107 Reykjavik, Iceland.
Starri HeiðmarssonIcelandic Institute of Natural History, IS-600 Akureyri, Iceland.ORCID https://orcid.org/0000-0003-0329-6882
University of Iceland · ISUniversity of Oslo · NOKunming Institute of Botany · CNUniversitat de València · ESDuke University · USNáttúrufræðistofnun · ISStaatliches Museum für Naturkunde Stuttgart · DEXuzhou Medical College · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The fungal mitochondrial small subunit (mtSSU) ribosomal DNA is one of the most commonly used loci for phylogenetic analysis of lichen-forming fungi, but their primer specificity to mycobionts has not been evaluated. The current study aimed to design mycobiont-specific mtSSU primers and highlights their utility with an example from the saxicolous lichen-forming fungal genus

Indexed as

MelaneliamtSSUParmeliaceaePCRprimer design

Identifiers

PMID37252058
PMCPMC10210050
OpenAlexW4328134649

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.