Evidence map›Paper›PMID 37249441›Full record

ArticleJournal of materials chemistry. B2023

Thiophene-based organic dye with large Stokes shift and deep red emission for live cell NAD(P)H detection under varying chemical stimuli.

Sushil K Dwivedi, Dilka Liyana Arachchige, Adenike Olowolagba, Mohamed Mahmoud, Jenna Cunnien, Daniel R Tucker, Delaney Fritz, Thomas Werner, Rudy L Luck, Haiying Liu

Open access · greenAbstract read
In one paragraph

Article in Journal of materials chemistry. B, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
2.6field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 27 citations in OpenAlex.

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  10. Dynamic insights into mitochondrial function: Monitoring viscosity and SOJournal of photochemistry and photobiology. B, Biology · 2024
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 1 institution in 1 country.

Sushil K DwivediDepartment of Chemistry, Michigan Technological University, Houghton, MI 49931, USA. rluck@mtu.edu.
Dilka Liyana ArachchigeDepartment of Chemistry, Michigan Technological University, Houghton, MI 49931, USA. rluck@mtu.edu.
Adenike OlowolagbaDepartment of Chemistry, Michigan Technological University, Houghton, MI 49931, USA. rluck@mtu.edu.ORCID 0000-0003-1360-4519
Mohamed MahmoudDepartment of Chemistry, Michigan Technological University, Houghton, MI 49931, USA. rluck@mtu.edu.
Jenna CunnienDepartment of Chemistry, Michigan Technological University, Houghton, MI 49931, USA. rluck@mtu.edu.
Daniel R TuckerDepartment of Chemistry, Michigan Technological University, Houghton, MI 49931, USA. rluck@mtu.edu.
Delaney FritzDepartment of Biological Sciences, Michigan Technological University, Houghton, MI 49931, USA.
Thomas WernerDepartment of Biological Sciences, Michigan Technological University, Houghton, MI 49931, USA.
Rudy L LuckDepartment of Chemistry, Michigan Technological University, Houghton, MI 49931, USA. rluck@mtu.edu.ORCID 0000-0001-5436-1942
Haiying LiuDepartment of Chemistry, Michigan Technological University, Houghton, MI 49931, USA. rluck@mtu.edu.ORCID 0000-0001-8351-2017
Michigan Technological University · US

Funding

Ratiometric Near-infrared Fluorescent Probes for Lysosomal pH in Living CellsR15GM114751 · NIGMS · MICHIGAN TECHNOLOGICAL UNIVERSITY · PI LIU, HAIYING · 2015 to 2019
$798k
Near-infrared Fluorescent Probes for Sensitive Detection of NADH in Live CellsR15GM146206 · NIGMS · MICHIGAN TECHNOLOGICAL UNIVERSITY · PI LIU, HAIYING · 2022 to 2024
$588k
NIGMS NIH HHS R15 GM114751NIGMS NIH HHS R15 GM146206
6 · The paper itself

Abstract

We report a novel method for synthesizing red and deep red cyanine dyes with large Stokes shifts, probes A and B, for live cell NAD(P)H detection. The probes were prepared using thiophene-based organic dyes featuring a π-conjugated bridge of thiophene and 3,4-ethylenedioxythiophene units linking the 1-methylquinolinium acceptor and formyl acceptor, respectively. These probes display weak absorption peaks at 315 nm (A) and 334 nm (B) and negligible fluorescence in the absence of NADH. However, upon the presence of NADH, new absorption and fluorescence peaks appear at 477 nm and 619 nm for probe A and at 486 nm and 576 nm for probe B, respectively. This is due to the NADH-facilitated reduction of the 1-methylquinolinium unit into 1-methyl-1,4-dihydroquinoline, which then acts as the electron donor for the probes, leading to the formation of well-defined electron donor-acceptor dye systems. Probe A has a large Stokes shift of 144 nm, which allows for better separation between the excitation and emission spectra, reducing spectral overlap and improving the accuracy of fluorescence measurements. The probes are highly selective for NAD(P)H, water-soluble, biocompatible, and easily permeable to cells. They are also photostable and were successfully used to monitor changes in NADH concentration in live cells during glycolysis in the presence of glucose, lactate, and pyruvate, treatment of FCCP and cancer drug cisplatin, and under hypoxia triggered by CoCl

Indexed as

Fluorescent DyesNADAnimalsCisplatinDrosophila melanogasterThiophenesCisplatinFluorescent DyesNADThiophenes

Identifiers

PMID37249441
PMCPMC10524713
OpenAlexW4377834864

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.