Evidence map›Paper›PMID 37248229›Full record

ArticleNature communications2023

Evidence-driven spatiotemporal COVID-19 hospitalization prediction with Ising dynamics.

Junyi Gao, Joerg Heintz, Christina Mack, Lucas Glass, Adam Cross, Jimeng Sun

Abstract read
In one paragraph

Article in Nature communications, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. Pooled it
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  9. Multi-faceted analysis and prediction for the outbreak of pediatric respiratory syncytial virus.Journal of the American Medical Informatics Association : JAMIA · 2023
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Junyi GaoThe University of Edinburgh, Edinburgh, Edinburgh, UK.ORCID 0000-0002-4951-8682
Joerg HeintzUniversity of Illinois Urbana Champaign, Champaign, IL, USA.ORCID 0000-0002-4542-390X
Christina MackIQVIA, Durham, North Carolina, USA.
Lucas GlassIQVIA, Durham, North Carolina, USA.
Adam CrossUniversity of Illinois, College of Medicine Peoria, Department of Research Services, Peoria, IL, USA. arcross@uic.edu.ORCID 0000-0001-5866-5943
Jimeng SunUniversity of Illinois Urbana Champaign, Champaign, IL, USA. jimeng@illinois.edu.ORCID 0000-0003-1512-6426

Funding

Big Data and Deep Learning for the Interictal-Ictal-Injury ContiuumR01NS107291 · NINDS · MASSACHUSETTS GENERAL HOSPITAL · PI WESTOVER, MICHAEL BRANDON · 2018 to 2022
$2.8M
NINDS NIH HHS R01 NS107291Wellcome TrustWellcome Trust 218529/Z/19/Z
6 · The paper itself

Abstract

In this work, we aim to accurately predict the number of hospitalizations during the COVID-19 pandemic by developing a spatiotemporal prediction model. We propose HOIST, an Ising dynamics-based deep learning model for spatiotemporal COVID-19 hospitalization prediction. By drawing the analogy between locations and lattice sites in statistical mechanics, we use the Ising dynamics to guide the model to extract and utilize spatial relationships across locations and model the complex influence of granular information from real-world clinical evidence. By leveraging rich linked databases, including insurance claims, census information, and hospital resource usage data across the U.S., we evaluate the HOIST model on the large-scale spatiotemporal COVID-19 hospitalization prediction task for 2299 counties in the U.S. In the 4-week hospitalization prediction task, HOIST achieves 368.7 mean absolute error, 0.6 [Formula: see text] and 0.89 concordance correlation coefficient score on average. Our detailed number needed to treat (NNT) and cost analysis suggest that future COVID-19 vaccination efforts may be most impactful in rural areas. This model may serve as a resource for future county and state-level vaccination efforts.

Indexed as

COVID-19COVID-19 VaccinesDatabases, FactualHospitalizationHumansPandemicsCOVID-19 Vaccines

Identifiers

PMID37248229
PMCPMC10226446

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.