Evidence map›Paper›PMID 37247811›Full record

ArticleChemico-biological interactions2023

Specific base catalysis by yeast alcohol dehydrogenase I with substitutions of histidine-48 by glutamate or serine residues in the proton relay system.

Bryce V Plapp, Darla Ann Kratzer, Susan K Souhrada, Edda Warth, Tobias Jacobi

Open access · greenAbstract read
In one paragraph

Article in Chemico-biological interactions, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
0.5field-weighted citation impact, top 33% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 3 citations in OpenAlex.

  1. Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Bryce V PlappDepartment of Biochemistry and Molecular Biology, The University of Iowa, Iowa City, IA, 52242, USA. Electronic address: bv-plapp@uiowa.edu.
Darla Ann KratzerDepartment of Biochemistry and Molecular Biology, The University of Iowa, Iowa City, IA, 52242, USA. Electronic address: pastorkratzer@gmail.com.
Susan K SouhradaDepartment of Biochemistry and Molecular Biology, The University of Iowa, Iowa City, IA, 52242, USA. Electronic address: souhrada@iastate.edu.
Edda WarthDepartment of Biochemistry and Molecular Biology, The University of Iowa, Iowa City, IA, 52242, USA. Electronic address: Edda.Warth@rpda.hessen.de.
Tobias JacobiDepartment of Biochemistry and Molecular Biology, The University of Iowa, Iowa City, IA, 52242, USA. Electronic address: Tobias.Jacobi@mkuem.rlp.de.
University of Iowa · US

Funding

SPECIFICITY OF ALCOHOL DEHYDROGENASESR01AA000279 · NIAAA · UNIVERSITY OF IOWA · PI PLAPP, BRYCE V · 1985 to 2004
$1.4M
NIAAA NIH HHS R01 AA000279
6 · The paper itself

Abstract

His-48 in yeast alcohol dehydrogenase I (His 51 in horse liver alcohol dehydrogenase) is a highly conserved residue in the active sites of many alcohol dehydrogenases. The imidazole group of His-48 may participate in base catalysis of proton transfer as it is linked by hydrogen bonds through the 2'-hydroxyl group of the nicotinamide ribose and the hydroxyl group of Thr-45 to the hydroxyl group of the alcohol bound to the catalytic zinc. In this study, His-48 was substituted with a glutamic acid residue to determine if a carboxylate could replace imidazole or to a serine residue to determine if the exposure of the 2'-hydroxyl group of the ribose to solvent would allow proton transfer to water without base catalysis. At pH 7.3, the H48E substitution increases affinity for NAD

Indexed as

Alcohol DehydrogenaseGlutamic AcidAcetaldehydeAnimalsCatalysisDeuteriumEthanolHistidineHorsesHydrogen-Ion ConcentrationKineticsMutagenesis, Site-DirectedNADProtonsSaccharomyces cerevisiaeSerineAcetaldehydeAlcohol DehydrogenaseDeuteriumEthanolGlutamic AcidHistidineNADProtonsSerineEnzyme kineticsEnzyme mechanismHydroxide catalysisMutagenesisProton transfer

Identifiers

PMID37247811
PMCPMC10527620
OpenAlexW4378528835

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.