Evidence map›Paper›PMID 37246777›Full record

ArticleNeuro-oncology2023

Significant increase of high-risk chromosome 1q gain and 6q loss at recurrence in posterior fossa group A ependymoma: A multicenter study.

Andrew M Donson, Kelsey C Bertrand, Kent A Riemondy, Dexiang Gao, Yonghua Zhuang, Bridget Sanford, Gregory A Norris, Rebecca J Chapman, Rui Fu, Nicholas Willard and 12 more

Abstract readMulticenter Study
In one paragraph

Article in Neuro-oncology, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed.

  1. Trial
  2. Article
  3. Review
  4. Review
  5. Article
  6. Review
  7. A brief history of ependymoma.Neuro-oncology · 2026
    Review
  8. Article
  9. Article
  10. Review
  11. Article
  12. Glioma.Nature reviews. Disease primers · 2024
    Review
  13. Development of Chromosome 1q+ Specific Treatment for Highest Risk Pediatric Posterior Fossa Ependymoma.Clinical cancer research : an official journal of the American Association for Cancer Research · 2024
    Article
  14. Article
  15. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

22 authors.

Andrew M DonsonDepartment of Pediatrics, University of Colorado Anschutz Medical Campus, Aurora, Colorado, USA.ORCID 0000-0003-1153-6911
Kelsey C BertrandSt. Jude Children's Research Hospital, Memphis, TN, USA.ORCID 0000-0001-6382-5411
Kent A RiemondyRNA Biosciences Initiative, University of Colorado Anschutz Medical Campus, Aurora, Colorado, USA.ORCID 0000-0002-2464-7808
Dexiang GaoDepartment of Pediatrics, University of Colorado Anschutz Medical Campus, Aurora, Colorado, USA.ORCID 0000-0003-3920-7060
Yonghua ZhuangDepartment of Pediatrics, University of Colorado Anschutz Medical Campus, Aurora, Colorado, USA.ORCID 0000-0002-1822-2395
Bridget SanfordDepartment of Pediatrics, University of Colorado Anschutz Medical Campus, Aurora, Colorado, USA.ORCID 0000-0002-2173-0198
Gregory A NorrisDepartment of Pediatrics, University of Colorado Anschutz Medical Campus, Aurora, Colorado, USA.ORCID 0000-0002-4131-5282
Rebecca J ChapmanChildren's Brain Tumor Research Centre, University of Nottingham, Nottingham, UK.ORCID 0000-0001-8050-8426
Rui FuComputational Biology, New York Genome Center, New York, New York, USA.
Nicholas WillardDepartment of Pathology, University of Colorado Denver, Aurora, Colorado, USA.ORCID 0000-0003-4912-201X
Andrea M GriesingerDepartment of Pediatrics, University of Colorado Anschutz Medical Campus, Aurora, Colorado, USA.ORCID 0000-0002-2831-1009
Graziella Ribeiro de SousaDepartment of Pediatrics, University of Colorado Anschutz Medical Campus, Aurora, Colorado, USA.ORCID 0000-0003-1809-8539
Vladimir AmaniDepartment of Pediatrics, University of Colorado Anschutz Medical Campus, Aurora, Colorado, USA.ORCID 0000-0002-2280-2317
Enrique GrimaldoDepartment of Pediatrics, University of Colorado Anschutz Medical Campus, Aurora, Colorado, USA.
Todd C HankinsonMorgan Adams Foundation Pediatric Brain Tumor Research Program, Children's Hospital Colorado, Aurora, Colorado, USA.ORCID 0000-0002-6288-9496
Ffyona BookerChildren's Brain Tumor Research Centre, University of Nottingham, Nottingham, UK.
Martin SillHopp-Children's Cancer Center Heidelberg (KiTZ), Heidelberg, Germany.ORCID 0000-0001-7616-7665
Richard G GrundyChildren's Brain Tumor Research Centre, University of Nottingham, Nottingham, UK.ORCID 0000-0002-2585-2539
Kristian W PajtlerHopp-Children's Cancer Center Heidelberg (KiTZ), Heidelberg, Germany.ORCID 0000-0002-3562-6121
David W EllisonSt. Jude Children's Research Hospital, Memphis, TN, USA.
Nicholas K ForemanDepartment of Pediatrics, University of Colorado Anschutz Medical Campus, Aurora, Colorado, USA.ORCID 0000-0003-4848-4801
Timothy A RitzmannChildren's Brain Tumor Research Centre, University of Nottingham, Nottingham, UK.ORCID 0000-0002-4438-6588

Funding

University of Colorado Cancer Center Support Grant - Lung Cancer Patient-Derived Xenografts with Autologous Human Immune SystemsP30CA046934 · NCI · UNIVERSITY OF COLORADO DENVER · PI James V Degregori · 1988 to 2026
$117.0M
Investigation of a Novel Cancer Stem Cell Population in Ependymoma.R01CA237608 · NCI · UNIVERSITY OF COLORADO DENVER · PI FOREMAN, NICHOLAS K · 2019 to 2023
$1.8M
NCI NIH HHS P30 CA046934NCI NIH HHS R01 CA237608
6 · The paper itself

Abstract

backgroundEpendymoma (EPN) posterior fossa group A (PFA) has the highest rate of recurrence and the worst prognosis of all EPN molecular groups. At relapse, it is typically incurable even with re-resection and re-irradiation. The biology of recurrent PFA remains largely unknown; however, the increasing use of surgery at first recurrence has now provided access to clinical samples to facilitate a better understanding of this.

methodsIn this large longitudinal international multicenter study, we examined matched samples of primary and recurrent disease from PFA patients to investigate the biology of recurrence.

resultsDNA methylome derived copy number variants (CNVs) revealed large-scale chromosome gains and losses at recurrence in PFA. CNV changes were dominated by chromosome 1q gain and/or 6q loss, both previously identified as high-risk factors in PFA, which were present in 23% at presentation but increased to 61% at first recurrence. Multivariate survival analyses of this cohort showed that cases with 1q gain or 6q loss at first recurrence were significantly more likely to recur again. Predisposition to 1q+/6q- CNV changes at recurrence correlated with hypomethylation of heterochromatin-associated DNA at presentation. Cellular and molecular analyses revealed that 1q+/6q- PFA had significantly higher proportions of proliferative neuroepithelial undifferentiated progenitors and decreased differentiated neoplastic subpopulations.

conclusionsThis study provides clinically and preclinically actionable insights into the biology of PFA recurrence. The hypomethylation predisposition signature in PFA is a potential risk-classifier for trial stratification. We show that the cellular heterogeneity of PFAs evolves largely because of genetic evolution of neoplastic cells.

Indexed as

EpendymomaInfratentorial NeoplasmsChromosome AberrationsChromosomesHumansSurvival Analysischromosomal instabilityependymomaprognosisrecurrence

Identifiers

PMID37246777
PMCPMC10547517

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.