Evidence map›Paper›PMID 37244923›Full record

ArticleOncogenesis2023

Integrated analysis of single-cell and bulk RNA sequencing data reveals an immunostimulatory microenvironment in tumor thrombus of osteosarcoma.

Tao Ji, Qianyu Shi, Song Mei, Jiuhui Xu, Haijie Liang, Lu Xie, Tingting Ren, Kunkun Sun, Dasen Li, Xiaodong Tang and 2 more

Open access · goldAbstract read
In one paragraph

Article in Oncogenesis, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
2.3field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 14 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 3 institutions in 1 country.

Tao Ji *Department of Musculoskeletal Tumor, People's Hospital, Peking University, Beijing, 100044, China.
Qianyu Shi *Department of Musculoskeletal Tumor, People's Hospital, Peking University, Beijing, 100044, China.ORCID http://orcid.org/0000-0001-7860-0143
Song Mei *Shanghai Institute of Immunology, Shanghai Jiao Tong University School of Medicine, Shanghai, China.
Jiuhui XuDepartment of Musculoskeletal Tumor, People's Hospital, Peking University, Beijing, 100044, China.
Haijie LiangDepartment of Musculoskeletal Tumor, People's Hospital, Peking University, Beijing, 100044, China.
Lu XieDepartment of Musculoskeletal Tumor, People's Hospital, Peking University, Beijing, 100044, China.
Tingting RenDepartment of Musculoskeletal Tumor, People's Hospital, Peking University, Beijing, 100044, China.
Kunkun SunDepartment of Pathology, People's Hospital, Peking University, Beijing, 100044, China.
Dasen LiDepartment of Musculoskeletal Tumor, People's Hospital, Peking University, Beijing, 100044, China.
Xiaodong TangDepartment of Musculoskeletal Tumor, People's Hospital, Peking University, Beijing, 100044, China.
Peng ZhangBeijing Key Laboratory for Genetics of Birth Defects, Beijing Pediatric Research Institute, MOE Key Laboratory of Major Diseases in Children, Rare Disease Center, Beijing Children's Hospital, Capital Medical University, National Center for Children's Health, Beijing, 100045, China. zhangpengdyx@163.com.ORCID http://orcid.org/0000-0002-6218-1885
Wei GuoDepartment of Musculoskeletal Tumor, People's Hospital, Peking University, Beijing, 100044, China. bonetumor@163.com.
Peking University · CNCapital Medical University · CNShanghai Jiao Tong University · CN

Funding

National Natural Science Foundation of China (National Science Foundation of China) 81872180
6 · The paper itself

Abstract

Tumor thrombus of bone sarcomas represents a unique reservoir for various types of cancer and immune cells, however, the investigation of tumor thrombus at a single-cell level is very limited. And it is still an open question to identify the thrombus-specific tumor microenvironment that is associated with the tumor-adaptive immune response. Here, by analyzing bulk tissue and single-cell level transcriptome from the paired thrombus and primary tumor samples of osteosarcoma (OS) patients, we define the immunostimulatory microenvironment in tumor thrombus of OS with a higher proportion of tumor-associated macrophages with M1-like states (TAM-M1) and TAM-M1 with high expression of CCL4. OS tumor thrombus is found to have upregulated IFN-γ and TGF-β signalings that are related to immune surveillance of circulating tumor cells in blood circulation. Further multiplexed immunofluorescence staining of the CD3/CD4/CD8A/CD68/CCL4 markers validates the immune-activated state in the tumor thrombus samples. Our study first reports the transcriptome differences at a single-cell level between tumor thrombus and primary tumor in sarcoma.

Identifiers

PMID37244923
PMCPMC10224931
OpenAlexW4378575351

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.