Evidence map›Paper›PMID 37243753›Full record

ArticleBiochemical genetics2024

Construction of a Cuproptosis-Related Gene Signature for Predicting Prognosis in Gastric Cancer.

Yongli Hu, Yan Du, Zhisheng Qiu, Pengwei Bai, Zhaozhao Bai, Chenglou Zhu, Junhong Wang, Tong Liang, Mingxu Da

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Article in Biochemical genetics, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

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5citing papers in PubMed
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1 · What the graph read from it

What it found

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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

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3 · Its place in the literature

Who cites it

5 citing papers in PubMed.

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4 · The record

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5 · Who and what money

Authors and funding

9 authors.

Yongli HuThe First Clinical Medical College of Lanzhou University, Lanzhou University, Lanzhou, China.
Yan DuThe First Clinical Medical College of Lanzhou University, Lanzhou University, Lanzhou, China.
Zhisheng QiuDepartment of Oncology Surgery, Gansu Provincial Hospital, Lanzhou, China.
Pengwei BaiClinical Medicine College, Ningxia Medical University, Yinchuan, China.
Zhaozhao BaiClinical Medicine College, Ningxia Medical University, Yinchuan, China.
Chenglou ZhuThe First Clinical Medical College of Lanzhou University, Lanzhou University, Lanzhou, China.
Junhong WangThe First Clinical Medical College of Lanzhou University, Lanzhou University, Lanzhou, China.
Tong LiangThe First Clinical Medical College of Lanzhou University, Lanzhou University, Lanzhou, China.
Mingxu DaThe First Clinical Medical College of Lanzhou University, Lanzhou University, Lanzhou, China. ldyy_damx@lzu.edu.cn.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

This study aimed to develop and validate a cuproptosis-related gene signature for the prognosis of gastric cancer. The data in TCGA GC TPM format from UCSC were extracted for analysis, and GC samples were randomly divided into training and validation groups. Pearson correlation analysis was used to obtain cuproptosis-related genes co-expressed with 19 Cuproptosis genes. Univariate Cox and Lasso regression analyses were used to obtain cuproptosis-related prognostic genes. Multivariate Cox regression analysis was used to construct the final prognostic risk model. The risk score curve, Kaplan-Meier survival curves, and ROC curve were used to evaluate the predictive ability of Cox risk model. Finally, the functional annotation of the risk model was obtained through enrichment analysis. Then, a six-gene signature was identified in the training cohort and verified among all cohorts using Cox regression analyses and Kaplan-Meier plots, demonstrating its independent prognostic significance for gastric cancer. In addition, ROC analysis confirmed the significant predictive potential of this signature for the prognosis of gastric cancer. Functional enrichment analysis was mainly related to cell-matrix function. Therefore, a new cuproptosis-related six-gene signature (ACLY, FGD6, SERPINE1, SPATA13, RANGAP1, and ADGRE5) was constructed for the prognosis of gastric cancer, allowing for tailored prediction of outcome and the formulation of novel therapeutics for gastric cancer patients.

Indexed as

Stomach NeoplasmsApoptosisHumansKaplan-Meier EstimateRisk FactorsROC CurveBioinformaticsCuproptosisGastric cancerPrognosis signature

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.