Evidence map›Paper›PMID 37242626›Full record

ArticlePharmaceutics2023

An Automated Customizable Live Web Crawler for Curation of Comparative Pharmacokinetic Data: An Intelligent Compilation of Research-Based Comprehensive Article Repository.

Remya Ampadi Ramachandran, Lisa A Tell, Sidharth Rai, Nuwan Indika Millagaha Gedara, Xuan Xu, Jim E Riviere, Majid Jaberi-Douraki

Abstract read
In one paragraph

Article in Pharmaceutics, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
  2. AutoPK: Leveraging LLMs and a Hybrid Similarity Metric for Advanced Retrieval of Pharmacokinetic Data from Complex Tables and Documents.International Conference on Tools with Artificial Intelligence : [proceedings]. International Conference on Tools for Artificial Intelligence · 2025
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Remya Ampadi Ramachandran1DATA Consortium, Kansas State University Olathe, Olathe, KS 66061, USA.
Lisa A TellFARAD, Department of Medicine and Epidemiology, School of Veterinary Medicine, University of California-Davis, Davis, CA 95616, USA.
Sidharth Rai1DATA Consortium, Kansas State University Olathe, Olathe, KS 66061, USA.
Nuwan Indika Millagaha Gedara1DATA Consortium, Kansas State University Olathe, Olathe, KS 66061, USA.ORCID 0000-0002-9862-8685
Xuan Xu1DATA Consortium, Kansas State University Olathe, Olathe, KS 66061, USA.ORCID 0000-0003-3349-7183
Jim E Riviere1DATA Consortium, Kansas State University Olathe, Olathe, KS 66061, USA.ORCID 0000-0001-8412-9650
Majid Jaberi-Douraki1DATA Consortium, Kansas State University Olathe, Olathe, KS 66061, USA.

Funding

BioNexus KC (20-7)National Pork Foundation's Board (19-122)USDA via the FARAD program Award No.: 2020-41480-32497, 2021-41480-35271, and 2022-41480-38135
6 · The paper itself

Abstract

Data curation has significant research implications irrespective of application areas. As most curated studies rely on databases for data extraction, the availability of data resources is extremely important. Taking a perspective from pharmacology, extracted data contribute to improved drug treatment outcomes and well-being but with some challenges. Considering available pharmacology literature, it is necessary to review articles and other scientific documents carefully. A typical method of accessing articles on journal websites is through long-established searches. In addition to being labor-intensive, this conventional approach often leads to incomplete-content downloads. This paper presents a new methodology with user-friendly models to accept search keywords according to the investigators' research fields for metadata and full-text articles. To accomplish this, scientifically published records on the pharmacokinetics of drugs were extracted from several sources using our navigating tool called the Web Crawler for Pharmacokinetics (WCPK). The results of metadata extraction provided 74,867 publications for four drug classes. Full-text extractions performed with WCPK revealed that the system is highly competent, extracting over 97% of records. This model helps establish keyword-based article repositories, contributing to comprehensive databases for article curation projects. This paper also explains the procedures adopted to build the proposed customizable-live WCPK, from system design and development to deployment phases.

Indexed as

application programming interface (API)digital object identifiers (DOIs)pharmacokinetics (PK)text and data mining (TDM)web crawler

Identifiers

PMID37242626
PMCPMC10223110

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.