Evidence map›Paper›PMID 37238980›Full record

ArticleBiomedicines2023

A Simple and Affordable Method to Create Nonsense Mutation Clones of p53 for Studying the Premature Termination Codon Readthrough Activity of PTC124.

Chia-Chi Chen, Ruo-Yu Liao, Fang-Yu Yeh, Yu-Rou Lin, Tze-You Wu, Alexa Escobar Pastor, Danny Danilo Zul, Yun-Chien Hsu, Kuan-Yo Wu, Ke-Fang Liu and 3 more

Open access · goldAbstract read
In one paragraph

Article in Biomedicines, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.5field-weighted citation impact, top 34% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 3 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 4 institutions in 1 country.

Chia-Chi ChenSchool of Medicine, I-Shou University, Kaohsiung City 82445, Taiwan.ORCID 0000-0002-4905-3408
Ruo-Yu LiaoDepartment of Medical Laboratory Science, I-Shou University, Kaohsiung City 82445, Taiwan.
Fang-Yu YehSchool of Medicine, I-Shou University, Kaohsiung City 82445, Taiwan.
Yu-Rou LinSchool of Medicine, I-Shou University, Kaohsiung City 82445, Taiwan.
Tze-You WuDepartment of Biomedical Engineering, I-Shou University, Kaohsiung City 82445, Taiwan.
Alexa Escobar PastorSchool of Medicine for International Students, I-Shou University, Kaohsiung City 82445, Taiwan.
Danny Danilo ZulSchool of Medicine for International Students, I-Shou University, Kaohsiung City 82445, Taiwan.
Yun-Chien HsuSchool of Medicine, I-Shou University, Kaohsiung City 82445, Taiwan.
Kuan-Yo WuDepartment of Biological Science and Technology, I-Shou University, Kaohsiung City 82445, Taiwan.
Ke-Fang LiuDepartment of Medical Laboratory Science, I-Shou University, Kaohsiung City 82445, Taiwan.
Reiji KannagiInstitute of Biomedical Sciences, Academia Sinica, Taipei City 11529, Taiwan.ORCID 0000-0003-4202-2921
Jang-Yi ChenInstitute of Biology and Anatomy, National Defense Medical Center, Taipei City 11529, Taiwan.ORCID 0000-0003-0179-4984
Bi-He CaiSchool of Medicine, I-Shou University, Kaohsiung City 82445, Taiwan.ORCID 0000-0003-4226-6096
I-Shou University · TWE-Da Hospital · TWInstitute of Biomedical Sciences, Academia Sinica · TWNational Defense Medical Center · TW

Funding

Medical Student Research and Development Scholarship Program EDAHS111038Ministry of Science and Technology, Taiwan MOST 111-2813-C-214-032-B
6 · The paper itself

Abstract

(1) Background: A premature termination codon (PTC) can be induced by a type of point mutation known as a nonsense mutation, which occurs within the coding region. Approximately 3.8% of human cancer patients have nonsense mutations of p53. However, the non-aminoglycoside drug PTC124 has shown potential to promote PTC readthrough and rescue full-length proteins. The COSMIC database contains 201 types of p53 nonsense mutations in cancers. We built a simple and affordable method to create different nonsense mutation clones of p53 for the study of the PTC readthrough activity of PTC124. (2) Methods: A modified inverse PCR-based site-directed mutagenesis method was used to clone the four nonsense mutations of p53, including W91X, S94X, R306X, and R342X. Each clone was transfected into p53 null H1299 cells and then treated with 50 μM of PTC124. (3) Results: PTC124 induced p53 re-expression in H1299-R306X and H1299-R342X clones but not in H1299-W91X and H1299-S94X clones. (4) Conclusions: Our data showed that PTC124 more effectively rescued the C-terminal of p53 nonsense mutations than the N-terminal of p53 nonsense mutations. We introduced a fast and low-cost site-directed mutagenesis method to clone the different nonsense mutations of p53 for drug screening.

Indexed as

nonsense mutationp53PTC124PTC readthroughsite-directed mutagenesis

Identifiers

PMID37238980
PMCPMC10216193
OpenAlexW4367313941

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.