Evidence map›Paper›PMID 37236970›Full record

ArticleNature communications2023

Stacked binding of a PET ligand to Alzheimer's tau paired helical filaments.

Gregory E Merz, Matthew J Chalkley, Sophia K Tan, Eric Tse, Joanne Lee, Stanley B Prusiner, Nick A Paras, William F DeGrado, Daniel R Southworth

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 37 papers.

0numbers the graph read from it
0cells of the map it votes in
37citing papers in PubMed
13.6field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

37 citing papers in PubMed, 65 citations in OpenAlex.

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  12. Structure-specific Mini-Prion Model for Alzheimer's Disease Tau Fibrils.bioRxiv : the preprint server for biology · 2025
    Article
  13. Review
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  20. Structural basis of SARS-CoV-2 polymerase inhibition by nonnucleoside inhibitor HeE1-2Tyr.Proceedings of the National Academy of Sciences of the United States of America · 2025
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 1 institution in 1 country.

Gregory E MerzInstitute for Neurodegenerative Diseases, University of California San Francisco, San Francisco, CA, USA.ORCID http://orcid.org/0000-0003-0842-4935
Matthew J ChalkleyDepartment of Pharmaceutical Chemistry, Cardiovascular Research Institute, University of California San Francisco, San Francisco, CA, USA.
Sophia K TanDepartment of Pharmaceutical Chemistry, Cardiovascular Research Institute, University of California San Francisco, San Francisco, CA, USA.
Eric TseInstitute for Neurodegenerative Diseases, University of California San Francisco, San Francisco, CA, USA.ORCID http://orcid.org/0000-0002-2082-9006
Joanne LeeInstitute for Neurodegenerative Diseases, University of California San Francisco, San Francisco, CA, USA.
Stanley B PrusinerInstitute for Neurodegenerative Diseases, University of California San Francisco, San Francisco, CA, USA.ORCID http://orcid.org/0000-0003-1955-5498
Nick A ParasInstitute for Neurodegenerative Diseases, University of California San Francisco, San Francisco, CA, USA.ORCID http://orcid.org/0000-0001-5742-4056
William F DeGradoInstitute for Neurodegenerative Diseases, University of California San Francisco, San Francisco, CA, USA.
Daniel R SouthworthInstitute for Neurodegenerative Diseases, University of California San Francisco, San Francisco, CA, USA. daniel.southworth@ucsf.edu.ORCID http://orcid.org/0000-0001-7108-9389
University of California, San Francisco · US

Funding

Technology and Remote Assessment CoreU19AG063911 · NIA · MAYO CLINIC ROCHESTER · PI John Kornak · 2019 to 2026
$120.9M
Early Onset AD Consortium - the LEAD Study (LEADS)U01AG057195 · NIA · INDIANA UNIVERSITY INDIANAPOLIS · PI APOSTOLOVA, LIANA G, CARRILLO, MARIA C · 2018 to 2023
$70.3M
TDP-43 Loss-of-Function: Biology to BiomarkersP01AG019724 · NIA · UNIVERSITY OF PENNSYLVANIA · PI Jennifer Merrilees · 2002 to 2026
$67.2M
VIRAL DEGENERATIVE DEMENTING DISEASE IN AGING (SUPP)P01AG002132 · NIA · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI SCHNIER, PAUL · 1985 to 2024
$51.7M
Research Education ComponentP30AG062422 · NIA · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI Gil Dan Rabinovici · 2019 to 2026
$36.9M
STRUCTURAL BIOLOGY TRAINING PROGRAMT32GM008284 · NIGMS · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI KORTEMME, TANJA · 1988 to 2022
$10.1M
O2-Reactivity in De Novo Designed Mononuclear, Non-Heme Fe ProteinsF32GM139379 · NIGMS · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI CHALKLEY, MATTHEW · 2020 to 2022
$193k
NIA NIH HHS P01 AG002132NIA NIH HHS P01 AG019724NIA NIH HHS P30 AG062422NIA NIH HHS U01 AG057195NIA NIH HHS U19 AG063911NIGMS NIH HHS F32 GM139379NIGMS NIH HHS T32 GM008284
6 · The paper itself

Abstract

Accumulation of filamentous aggregates of tau protein in the brain is a pathological hallmark of Alzheimer's disease (AD) and many other neurodegenerative tauopathies. The filaments adopt disease-specific cross-β amyloid conformations that self-propagate and are implicated in neuronal loss. Development of molecular diagnostics and therapeutics is of critical importance. However, mechanisms of small molecule binding to the amyloid core is poorly understood. We used cryo-electron microscopy to determine a 2.7 Å structure of AD patient-derived tau paired-helical filaments bound to the PET ligand GTP-1. The compound is bound stoichiometrically at a single site along an exposed cleft of each protofilament in a stacked arrangement matching the fibril symmetry. Multiscale modeling reveals pi-pi aromatic interactions that pair favorably with the small molecule-protein contacts, supporting high specificity and affinity for the AD tau conformation. This binding mode offers critical insight into designing compounds to target different amyloid folds found across neurodegenerative diseases.

Indexed as

Alzheimer Diseasetau ProteinsAmyloidCryoelectron MicroscopyHumansLigandsAmyloidLigandstau Proteins

Identifiers

PMID37236970
PMCPMC10220082
OpenAlexW4378470706

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.