Evidence map›Paper›PMID 37235661›Full record

ArticleScience advances2023

Global analysis of the yeast knockout phenome.

Gina Turco, Christie Chang, Rebecca Y Wang, Griffin Kim, Emily H Stoops, Brianna Richardson, Vanessa Sochat, Jennifer Rust, Rose Oughtred, Nathaniel Thayer and 7 more

Abstract read
In one paragraph

Article in Science advances, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 23 papers.

0numbers the graph read from it
0cells of the map it votes in
23citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

23 citing papers in PubMed.

  1. Review
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Yeast adapts to diverse ecological niches driven by genomics and metabolic reprogramming.Proceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  11. Review
  12. Article
  13. Article
  14. Article
  15. Article
  16. Review
  17. Dynamics of karyotype evolution.Chaos (Woodbury, N.Y.) · 2024
    Article
  18. Article
  19. Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

17 authors.

Gina TurcoCalico Life Sciences LLC, South San Francisco, CA, USA.ORCID 0000-0003-4178-3577
Christie ChangLewis-Sigler Institute for Integrative Genomics, Princeton University, Princeton, NJ, USA.
Rebecca Y WangCalico Life Sciences LLC, South San Francisco, CA, USA.
Griffin KimCalico Life Sciences LLC, South San Francisco, CA, USA.
Emily H StoopsCalico Life Sciences LLC, South San Francisco, CA, USA.ORCID 0000-0002-8620-1916
Brianna RichardsonLewis-Sigler Institute for Integrative Genomics, Princeton University, Princeton, NJ, USA.
Vanessa SochatLawrence Livermore National Laboratory, Livermore, CA, USA.ORCID 0000-0002-4387-3819
Jennifer RustLewis-Sigler Institute for Integrative Genomics, Princeton University, Princeton, NJ, USA.
Rose OughtredLewis-Sigler Institute for Integrative Genomics, Princeton University, Princeton, NJ, USA.
Nathaniel ThayerCalico Life Sciences LLC, South San Francisco, CA, USA.
Fan KangLewis-Sigler Institute for Integrative Genomics, Princeton University, Princeton, NJ, USA.ORCID 0009-0009-6423-0474
Michael S LivstoneLewis-Sigler Institute for Integrative Genomics, Princeton University, Princeton, NJ, USA.ORCID 0000-0001-5386-5823
Sven HeinickeLewis-Sigler Institute for Integrative Genomics, Princeton University, Princeton, NJ, USA.
Mark SchroederLewis-Sigler Institute for Integrative Genomics, Princeton University, Princeton, NJ, USA.
Kara J DolinskiLewis-Sigler Institute for Integrative Genomics, Princeton University, Princeton, NJ, USA.ORCID 0000-0002-7010-0264
David BotsteinCalico Life Sciences LLC, South San Francisco, CA, USA.
Anastasia BaryshnikovaCalico Life Sciences LLC, South San Francisco, CA, USA.ORCID 0000-0002-0123-2052

Funding

Systematic data curation and integration to link models of human diseaseR24OD011194 · OD · PRINCETON UNIVERSITY · PI DOLINSKI, KARA · 2012 to 2014
$1.9M
NIH HHS R24 OD011194
6 · The paper itself

Abstract

Genome-wide phenotypic screens in the budding yeast

Indexed as

Saccharomyces cerevisiaeHumans

Identifiers

PMID37235661
PMCPMC11326039

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.