Evidence map›Paper›PMID 37235648›Full record

ArticleScience advances2023

CAGE sequencing reveals CFTR-dependent dysregulation of type I IFN signaling in activated cystic fibrosis macrophages.

Jonathan L Gillan, Mithil Chokshi, Gareth R Hardisty, Sara Clohisey Hendry, Daniel Prasca-Chamorro, Nicola J Robinson, Benjamin Lasota, Richard Clark, Lee Murphy, Moira K B Whyte and 4 more

Open access · goldAbstract read
In one paragraph

Article in Science advances, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
4.1field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 16 citations in OpenAlex.

  1. Review
  2. Phage-Based Approaches to ChronicAntibiotics (Basel, Switzerland) · 2026
    Review
  3. Article
  4. Article
  5. TGF-β induces excessive pulmonary IL-6 secretion in cystic fibrosis via PI3K.American journal of physiology. Lung cellular and molecular physiology · 2025
    Article
  6. Review
  7. Managing an ageing cystic fibrosis population: challenges and priorities.European respiratory review : an official journal of the European Respiratory Society · 2025
    Review
  8. Wound repair and immune function in theFrontiers in cellular and infection microbiology · 2025
    Review
  9. Article
  10. Article
  11. Article
  12. Macrophage Dysfunction in Respiratory Disease.Results and problems in cell differentiation · 2024
    Review
  13. Article
  14. Article
  15. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 4 institutions in 2 countries.

Jonathan L GillanUniversity of Edinburgh Centre for Inflammation Research, Queen's Medical Research Institute, 47 Little France Crescent, Edinburgh, EH16 4TJ, UK.ORCID 0000-0002-9017-253X
Mithil ChokshiDepartment of Bioengineering, Rice University, Houston, TX, USA.
Gareth R HardistyUniversity of Edinburgh Centre for Inflammation Research, Queen's Medical Research Institute, 47 Little France Crescent, Edinburgh, EH16 4TJ, UK.
Sara Clohisey HendryThe Roslin Institute, University of Edinburgh, Edinburgh, EH25 9RG.ORCID 0000-0001-7489-9846
Daniel Prasca-ChamorroDepartment of Bioengineering, Rice University, Houston, TX, USA.
Nicola J RobinsonUniversity of Edinburgh Centre for Inflammation Research, Queen's Medical Research Institute, 47 Little France Crescent, Edinburgh, EH16 4TJ, UK.ORCID 0000-0003-2523-0200
Benjamin LasotaDepartment of Bioengineering, Rice University, Houston, TX, USA.ORCID 0009-0000-5537-5713
Richard ClarkEdinburgh Clinical Research Facility, University of Edinburgh, Western General Hospital, Edinburgh, EH4 2XU, UK.ORCID 0000-0002-0066-1541
Lee MurphyEdinburgh Clinical Research Facility, University of Edinburgh, Western General Hospital, Edinburgh, EH4 2XU, UK.ORCID 0000-0001-6467-7449
Moira K B WhyteUniversity of Edinburgh Centre for Inflammation Research, Queen's Medical Research Institute, 47 Little France Crescent, Edinburgh, EH16 4TJ, UK.ORCID 0000-0001-7788-1852
J Kenneth BaillieThe Roslin Institute, University of Edinburgh, Edinburgh, EH25 9RG.ORCID 0000-0001-5258-793X
Donald J DavidsonUniversity of Edinburgh Centre for Inflammation Research, Queen's Medical Research Institute, 47 Little France Crescent, Edinburgh, EH16 4TJ, UK.ORCID 0000-0002-8782-199X
Gang BaoDepartment of Bioengineering, Rice University, Houston, TX, USA.ORCID 0000-0001-5501-554X
Robert D GrayUniversity of Edinburgh Centre for Inflammation Research, Queen's Medical Research Institute, 47 Little France Crescent, Edinburgh, EH16 4TJ, UK.ORCID 0000-0002-2203-2703
Centre for Inflammation Research · GBRice University · USRoslin Institute · GBWestern General Hospital · GB

Funding

Medical Research Council G1002046Medical Research Council MC_PC_19025Medical Research Council MC_PC_20004Wellcome Trust
6 · The paper itself

Abstract

An intense, nonresolving airway inflammatory response leads to destructive lung disease in cystic fibrosis (CF). Dysregulation of macrophage immune function may be a key facet governing the progression of CF lung disease, but the underlying mechanisms are not fully understood. We used 5' end centered transcriptome sequencing to profile

Indexed as

Cystic FibrosisCystic Fibrosis Transmembrane Conductance RegulatorHumansMacrophagesMutationPseudomonas aeruginosaSignal TransductionCFTR protein, humanCystic Fibrosis Transmembrane Conductance Regulator

Identifiers

PMID37235648
PMCPMC10219589
OpenAlexW4378472851

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.