Evidence map›Paper›PMID 37234458›Full record

ArticleNeurophotonics2023

Effects of formalin fixation on polarimetric properties of brain tissue: fresh or fixed?

Romain Gros, Omar Rodríguez-Núñez, Leonard Felger, Stefano Moriconi, Richard McKinley, Angelo Pierangelo, Tatiana Novikova, Erik Vassella, Philippe Schucht, Ekkehard Hewer and 1 more

Abstract read
In one paragraph

Article in Neurophotonics, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors.

Romain GrosUniversity of Bern, Institute of Tissue Medicine and Pathology, Bern, Switzerland.ORCID https://orcid.org/0000-0002-0911-2792
Omar Rodríguez-NúñezBern University Hospital, University of Bern, Department of Neurosurgery, Inselspital, Bern, Switzerland.ORCID https://orcid.org/0000-0003-0280-9519
Leonard FelgerBern University Hospital, University of Bern, Department of Neurosurgery, Inselspital, Bern, Switzerland.
Stefano MoriconiUniversity of Bern, Inselspital, Bern University Hospital, University Institute of Diagnostic and Interventional Radiology, Support Center for Advanced Neuroimaging, Bern, Switzerland.ORCID https://orcid.org/0000-0002-5705-7839
Richard McKinleyUniversity of Bern, Inselspital, Bern University Hospital, University Institute of Diagnostic and Interventional Radiology, Support Center for Advanced Neuroimaging, Bern, Switzerland.
Angelo PierangeloIP Paris, École Polytechnique, CNRS, LPICM, Palaiseau, France.
Tatiana NovikovaIP Paris, École Polytechnique, CNRS, LPICM, Palaiseau, France.ORCID https://orcid.org/0000-0002-9048-9158
Erik VassellaUniversity of Bern, Institute of Tissue Medicine and Pathology, Bern, Switzerland.
Philippe SchuchtBern University Hospital, University of Bern, Department of Neurosurgery, Inselspital, Bern, Switzerland.
Ekkehard HewerLausanne University Hospital and University of Lausanne, Institute of Pathology, Lausanne, Switzerland.ORCID https://orcid.org/0000-0002-9128-0364
Theoni MaragkouUniversity of Bern, Institute of Tissue Medicine and Pathology, Bern, Switzerland.ORCID https://orcid.org/0000-0002-7774-760X

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Significance: Imaging Mueller polarimetry (IMP) appears as a promising technique for real-time delineation of healthy and neoplastic tissue during neurosurgery. The training of machine learning algorithms used for the image post-processing requires large data sets typically derived from the measurements of formalin-fixed brain sections. However, the success of the transfer of such algorithms from fixed to fresh brain tissue depends on the degree of alterations of polarimetric properties induced by formalin fixation (FF). Aim: Comprehensive studies were performed on the FF induced changes in fresh pig brain tissue polarimetric properties. Approach: Polarimetric properties of pig brain were assessed in 30 coronal thick sections before and after FF using a wide-field IMP system. The width of the uncertainty region between gray and white matter was also estimated. Results: The depolarization increased by 5% in gray matter and remained constant in white matter following FF, whereas the linear retardance decreased by 27% in gray matter and by 28% in white matter after FF. The visual contrast between gray and white matter and fiber tracking remained preserved after FF. Tissue shrinkage induced by FF did not have a significant effect on the uncertainty region width. Conclusions: Similar polarimetric properties were observed in both fresh and fixed brain tissues, indicating a high potential for transfer learning.

Indexed as

brain tissueformalin fixationimage segmentationMueller polarimetryneuropathologyneurosurgery

Identifiers

PMID37234458
PMCPMC10207713

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.