Evidence map›Paper›PMID 37231013›Full record

ArticleNature communications2023

Maximizing protein production by keeping cells at optimal secretory stress levels using real-time control approaches.

Sebastián Sosa-Carrillo, Henri Galez, Sara Napolitano, François Bertaux, Gregory Batt

Abstract read
In one paragraph

Article in Nature communications, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed.

  1. Article
  2. Article
  3. Review
  4. Article
  5. ACS synthetic biology · 2025
    Article
  6. Review
  7. Review
  8. Screening microorganisms with robust and stable protein expression and secretion capacity.Protein science : a publication of the Protein Society · 2025
    Article
  9. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Sebastián Sosa-CarrilloInstitut Pasteur, Inria, Université Paris Cité, 75015, Paris, France.ORCID 0000-0001-9783-1684
Henri GalezInstitut Pasteur, Inria, Université Paris Cité, 75015, Paris, France.ORCID 0000-0002-1257-1615
Sara NapolitanoInstitut Pasteur, Inria, Université Paris Cité, 75015, Paris, France.
François Bertaux *Institut Pasteur, Inria, Université Paris Cité, 75015, Paris, France.
Gregory Batt *Institut Pasteur, Inria, Université Paris Cité, 75015, Paris, France. gregory.batt@inria.fr.ORCID 0000-0003-1697-139X

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Optimizing the production of recombinant proteins is a problem of major industrial and pharmaceutical importance. Secretion of the protein by the host cell considerably simplifies downstream purification processes. However, for many proteins, this is also the limiting production step. Current solutions involve extensive engineering of the chassis cell to facilitate protein trafficking and limit protein degradation triggered by excessive secretion-associated stress. Here, we propose instead a regulation-based strategy in which induction is dynamically adjusted to an optimal strength based on the current stress level of the cells. Using a small collection of hard-to-secrete proteins, a bioreactor-based platform with automated cytometry measurements, and a systematic assay to quantify secreted protein levels, we demonstrate that the secretion sweet spot is indicated by the appearance of a subpopulation of cells that accumulate high amounts of proteins, decrease growth, and face significant stress, that is, experience a secretion burnout. In these cells, adaptations capabilities are overwhelmed by a too strong production. Using these notions, we show for a single-chain antibody variable fragment that secretion levels can be improved by 70% by dynamically keeping the cell population at optimal stress levels using real-time closed-loop control.

Indexed as

BioreactorsSingle-Chain AntibodiesProtein TransportRecombinant ProteinsRecombinant ProteinsSingle-Chain Antibodies

Identifiers

PMID37231013
PMCPMC10212943

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.