Evidence map›Paper›PMID 37230979›Full record

ArticleNature communications2023

A neonatal mouse model characterizes transmissibility of SARS-CoV-2 variants and reveals a role for ORF8.

Bruno A Rodriguez-Rodriguez, Grace O Ciabattoni, Ralf Duerr, Ana M Valero-Jimenez, Stephen T Yeung, Keaton M Crosse, Austin R Schinlever, Lucie Bernard-Raichon, Joaquin Rodriguez Galvan, Marisa E McGrath and 9 more

Abstract read
In one paragraph

Article in Nature communications, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed.

  1. Review
  2. Omicron Impacts Olfaction in Hamsters.FASEB journal : official publication of the Federation of American Societies for Experimental Biology · 2025
    Article
  3. Review
  4. Review
  5. Article
  6. CD4Science advances · 2024
    Article
  7. Article
  8. SARS-CoV-2 immunity in animal models.Cellular & molecular immunology · 2024
    Review
  9. Article
  10. Review
  11. Animal models for COVID-19 and tuberculosis.Frontiers in immunology · 2023
    Review
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

19 authors.

Bruno A Rodriguez-Rodriguez *Department of Microbiology, New York University Grossman School of Medicine, New York, NY, 10016, USA.
Grace O Ciabattoni *Department of Microbiology, New York University Grossman School of Medicine, New York, NY, 10016, USA.
Ralf DuerrDepartment of Microbiology, New York University Grossman School of Medicine, New York, NY, 10016, USA.ORCID 0000-0001-9569-9237
Ana M Valero-JimenezDepartment of Microbiology, New York University Grossman School of Medicine, New York, NY, 10016, USA.
Stephen T YeungDepartment of Microbiology, New York University Grossman School of Medicine, New York, NY, 10016, USA.
Keaton M CrosseDepartment of Microbiology, New York University Grossman School of Medicine, New York, NY, 10016, USA.
Austin R SchinleverDepartment of Microbiology, New York University Grossman School of Medicine, New York, NY, 10016, USA.
Lucie Bernard-RaichonDepartment of Microbiology, New York University Grossman School of Medicine, New York, NY, 10016, USA.
Joaquin Rodriguez GalvanDepartment of Microbiology, New York University Grossman School of Medicine, New York, NY, 10016, USA.
Marisa E McGrathDepartment of Microbiology and Immunology, Center for Pathogen Research, University of Maryland School of Medicine, Baltimore, MD, 21201, USA.ORCID 0000-0002-7451-4958
Sanjay VasheeDepartment of Synthetic Biology and Bioenergy, J. Craig Venter Institute, Rockville, MD, 20850, USA.ORCID 0000-0001-6374-438X
Yong XueDepartment of Synthetic Biology and Bioenergy, J. Craig Venter Institute, Rockville, MD, 20850, USA.
Cynthia A LoomisDepartment of Pathology, New York University Grossman School of Medicine, New York, NY, 10016, USA.
Kamal M KhannaDepartment of Microbiology, New York University Grossman School of Medicine, New York, NY, 10016, USA.ORCID 0000-0002-9328-3817
Ken CadwellDivision of Gastroenterology and Hepatology, Department of Medicine, University of Pennsylvania Perelman School of Medicine, Philadelphia, PA, 19104, USA.ORCID 0000-0002-5860-0661
Ludovic DesvignesDepartment of Medicine/Division of Infectious Diseases and Immunology, New York University Grossman School of Medicine, New York, NY, 10016, USA.
Matthew B FriemanDepartment of Microbiology and Immunology, Center for Pathogen Research, University of Maryland School of Medicine, Baltimore, MD, 21201, USA.ORCID 0000-0003-0107-0775
Mila B OrtigozaDepartment of Microbiology, New York University Grossman School of Medicine, New York, NY, 10016, USA. Mila.Ortigoza@nyulangone.org.ORCID 0000-0002-4522-0184
Meike DittmannDepartment of Microbiology, New York University Grossman School of Medicine, New York, NY, 10016, USA. Meike.Dittmann@nyulangone.org.ORCID 0000-0002-1741-7916

Funding

Vaccine FacilityP30CA016087 · NCI · NEW YORK UNIVERSITY SCHOOL OF MEDICINE · PI MARK Reid PHILIPS · 1985 to 2026
$83.1M
INFECTIOUS DISEASES &BASIC MICROBIOLOGICAL MECHANISMST32AI007180 · NIAID · NEW YORK UNIVERSITY SCHOOL OF MEDICINE · PI WEISER, JEFFREY NEAL · 1985 to 2022
$8.9M
Diabetes, Digestive, and Kidney Diseases Extramural ResearchR01DK093668 · NIDDK · UNIVERSITY OF PENNSYLVANIA · PI Ken Hashigiwa Cadwell · 2011 to 2026
$7.3M
Novel lung resident interstitial macrophage subset with distinct localization and polarizationR01AI143861 · NIAID · NEW YORK UNIVERSITY SCHOOL OF MEDICINE · PI KHANNA, KAMAL MOHAN · 2019 to 2023
$3.3M
ELF1 - Molecular mechanisms of a novel transcription factor with broad antiviral activityR01AI143639 · NIAID · NEW YORK UNIVERSITY SCHOOL OF MEDICINE · PI WEISER, JEFFREY NEAL · 2019 to 2023
$2.5M
Biology of Influenza Virus TransmissionK08AI141759 · NIAID · NEW YORK UNIVERSITY SCHOOL OF MEDICINE · PI ORTIGOZA, MILA BRUM · 2019 to 2023
$939k
Multispectral imaging & analysis of intact tissue sections w/ the Perkin Elmer VectraS10OD021747 · OD · NEW YORK UNIVERSITY SCHOOL OF MEDICINE · PI LOOMIS, CYNTHIA A · 2016 to 2016
$359k
NCI NIH HHS P30 CA016087NIAID NIH HHS K08 AI141759NIAID NIH HHS R01 AI143639NIAID NIH HHS R01 AI143861NIAID NIH HHS T32 AI007180NIDDK NIH HHS R01 DK093668NIH HHS S10 OD021747
6 · The paper itself

Abstract

Small animal models have been a challenge for the study of SARS-CoV-2 transmission, with most investigators using golden hamsters or ferrets. Mice have the advantages of low cost, wide availability, less regulatory and husbandry challenges, and the existence of a versatile reagent and genetic toolbox. However, adult mice do not robustly transmit SARS-CoV-2. Here we establish a model based on neonatal mice that allows for transmission of clinical SARS-CoV-2 isolates. We characterize tropism, respiratory tract replication and transmission of ancestral WA-1 compared to variants Alpha (B.1.1.7), Beta (B.1.351), Gamma (P.1), Delta (B.1.617.2), Omicron BA.1 and Omicron BQ.1.1. We identify inter-variant differences in timing and magnitude of infectious particle shedding from index mice, both of which shape transmission to contact mice. Furthermore, we characterize two recombinant SARS-CoV-2 lacking either the ORF6 or ORF8 host antagonists. The removal of ORF8 shifts viral replication towards the lower respiratory tract, resulting in significantly delayed and reduced transmission in our model. Our results demonstrate the potential of our neonatal mouse model to characterize viral and host determinants of SARS-CoV-2 transmission, while revealing a role for an accessory protein in this context.

Indexed as

COVID-19SARS-CoV-2AnimalsAnimals, NewbornCricetinaeDisease Models, AnimalFerretsHumansMesocricetusMice

Identifiers

PMID37230979
PMCPMC10211296

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.