ArticleFrontiers in plant science2023
Comparative analysis of chloroplast genomes of 29 tomato germplasms: genome structures, phylogenetic relationships, and adaptive evolution.
Article in Frontiers in plant science, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.
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12 citing papers in PubMed.
- Intraspecific genetic variation of the hairy-fruited eggplant (Solanum lasiocarpum Dunal.) based on plastid genome sequences.Scientific reports · 2026Article
- Chloroplast genome comparative analysis and phylogenetic relationships of 15 Syringa species (Oleaceae).Genetics and molecular biology · 2026Article
- The Complete Chloroplast Genomes of ThreeCurrent issues in molecular biology · 2025Article
- Comprehensive analysis of 385 chloroplast genomes unveils phylogenetic relationships and evolutionary history in cassava.BMC plant biology · 2025Article
- Characterization and phylogenetic consideration of the complete chloroplast genome ofMitochondrial DNA. Part B, Resources · 2025Article
- The complete chloroplast genome ofMitochondrial DNA. Part B, Resources · 2025Article
- Comparative Chloroplast Genomes Analysis Provided Adaptive Evolution Insights inInternational journal of molecular sciences · 2024Article
- Solanum aculeatissimum and Solanum torvum chloroplast genome sequences: a comparative analysis with other Solanum chloroplast genomes.BMC genomics · 2024Article
- The complete Chloroplast genome of Stachys geobombycis and comparative analysis with related Stachys species.Scientific reports · 2024Article
- Reciprocal natural hybridization between Lycoris aurea and Lycoris radiata (Amaryllidaceae) identified by morphological, karyotypic and chloroplast genomic data.BMC plant biology · 2024Article
- Complete chloroplast genome data reveal the existence of theFrontiers in plant science · 2024Article
- The Chloroplast Genome of Endive (Genes · 2023Article
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11 authors.
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Abstract
In order to compare and analyze the chloroplast (cp) genomes of tomato germplasms and understand their phylogenetic relationships, the cp genomes of 29 tomato germplasms were sequenced and analyzed in this study. The results showed highly conserved characteristics in structure, number of gene and intron, inverted repeat regions, and repeat sequences among the 29 cp genomes. Moreover, single-nucleotide polymorphism (SNP) loci with high polymorphism located at 17 fragments were selected as candidate SNP markers for future studies. In the phylogenetic tree, the cp genomes of tomatoes were clustered into two major clades, and the genetic relationship between
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