Evidence map›Paper›PMID 37228707›Full record

ArticleProceedings of SPIE--the International Society for Optical Engineering2023

Deep Constrained Spherical Deconvolution for Robust Harmonization.

Tianyuan Yao, Francois Rheault, Leon Y Cai, Vishwesh Nath, Zuhayr Asad, Nancy Newlin, Can Cui, Ruining Deng, Karthik Ramadass, Kurt Schilling and 2 more

Abstract read
In one paragraph

Article in Proceedings of SPIE--the International Society for Optical Engineering, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Article
  2. Diffusion MRI with Machine Learning.Imaging neuroscience (Cambridge, Mass.) · 2024
    Article
  3. Article
  4. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors.

Tianyuan YaoDepartment of Computer Science, Vanderbilt University, Nashville, TN, 37235, USA.
Francois RheaultDepartment of Computer Science, Université de Sherbrooke, Sherbrooke, Québec, Canada.
Leon Y CaiDepartment of Biomedical Engineering, Vanderbilt University, Nashville, TN, 37212, USA.
Vishwesh NathNVIDIA Corporation, Bethesda, MD, 20814, USA.
Zuhayr AsadDepartment of Computer Science, Vanderbilt University, Nashville, TN, 37235, USA.
Nancy NewlinDepartment of Computer Science, Vanderbilt University, Nashville, TN, 37235, USA.
Can CuiDepartment of Computer Science, Vanderbilt University, Nashville, TN, 37235, USA.
Ruining DengDepartment of Computer Science, Vanderbilt University, Nashville, TN, 37235, USA.
Karthik RamadassDepartment of Biomedical Engineering, Vanderbilt University, Nashville, TN, USA.
Kurt SchillingDepartment of Electrical and Computer Engineering, Vanderbilt University, Nashville, TN, 37235, USA.
Bennett A LandmanDepartment of Computer Science, Vanderbilt University, Nashville, TN, 37235, USA.
Yuankai HuoDepartment of Computer Science, Vanderbilt University, Nashville, TN, 37235, USA.

Funding

VANDERBILT UNIVERSITY CTSA FOR PEDIATRIC RESEARCHUL1RR024975 · NCRR · VANDERBILT UNIVERSITY · PI BERNARD, GORDON RAPHAEL · 2007 to 2011
$45.7M
MEDICAL SCIENTIST TRAINING PROGRAMT32GM007347 · NIGMS · VANDERBILT UNIVERSITY · PI WILLIAMS, CHRISTOPHER S. · 1985 to 2023
$26.3M
Overall: Eunice Kennedy Shriver Intellectual and Developmental Disabilities Research Center at VanderbiltP50HD103537 · NICHD · VANDERBILT UNIVERSITY MEDICAL CENTER · PI Lea K Davis · 2020 to 2026
$10.3M
Postdoctoral Training in Biomedical MRI and MRST32EB001628 · NIBIB · VANDERBILT UNIVERSITY MEDICAL CENTER · PI John C Gore · 2003 to 2026
$7.0M
Controlling Quality and Capturing Uncertainty in Advanced Diffusion Weighted MRIR01EB017230 · NIBIB · VANDERBILT UNIVERSITY · PI LANDMAN, BENNETT A. · 2015 to 2024
$5.1M
Medical Scientist Training ProgramT32GM152284 · NIGMS · VANDERBILT UNIVERSITY · PI Christopher S. Williams · 2024 to 2026
$4.8M
NCRR NIH HHS UL1 RR024975NIBIB NIH HHS R01 EB017230NIBIB NIH HHS T32 EB001628NICHD NIH HHS P50 HD103537NIGMS NIH HHS T32 GM007347NIGMS NIH HHS T32 GM152284
6 · The paper itself

Abstract

Diffusion weighted magnetic resonance imaging (DW-MRI) captures tissue microarchitecture at millimeter scale. With recent advantages in data sharing, large-scale multi-site DW-MRI datasets are being made available for multi-site studies. However, DW-MRI suffers from measurement variability (e.g., inter- and intra-site variability, hardware performance, and sequence design), which consequently yields inferior performance on multi-site and/or longitudinal diffusion studies. In this study, we propose a novel, deep learning-based method to harmonize DW-MRI signals for a more reproducible and robust estimation of microstructure. Our method introduces a data-driven scanner-invariant regularization scheme to model a more robust fiber orientation distribution function (FODF) estimation. We study the Human Connectome Project (HCP) young adults test-retest group as well as the MASiVar dataset (with inter- and intra-site scan/rescan data). The 8

Indexed as

Deep learningDiffusionDW-MRIHarmonizationInter-scanner

Identifiers

PMID37228707
PMCPMC10208219

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.