Evidence map›Paper›PMID 37228285›Full record

ArticleERJ open research2023

Azithromycin alters spatial and temporal dynamics of airway microbiota in idiopathic pulmonary fibrosis.

Pieter-Jan Gijs, Cécile Daccord, Eric Bernasconi, Martin Brutsche, Christian F Clarenbach, Katrin Hostettler, Sabina A Guler, Louis Mercier, Niki Ubags, Manuela Funke-Chambour and 1 more

Open access · goldAbstract read
In one paragraph

Article in ERJ open research, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
1.0field-weighted citation impact, top 22% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 4 citations in OpenAlex.

  1. Review
  2. The lung microbiome in interstitial lung disease.Breathe (Sheffield, England) · 2025
    Review
  3. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 6 institutions in 2 countries.

Pieter-Jan GijsDivision of Pulmonology, Department of Medicine, CHUV, Lausanne University Hospital, University of Lausanne, Lausanne, Switzerland.ORCID https://orcid.org/0000-0002-1104-8064
Cécile DaccordDivision of Pulmonology, Department of Medicine, CHUV, Lausanne University Hospital, University of Lausanne, Lausanne, Switzerland.ORCID https://orcid.org/0000-0001-5034-2218
Eric BernasconiDivision of Pulmonology, Department of Medicine, CHUV, Lausanne University Hospital, University of Lausanne, Lausanne, Switzerland.ORCID https://orcid.org/0000-0002-4641-1409
Martin BrutscheLungenzentrum, Kantonsspital St Gallen, St Gallen, Switzerland.ORCID https://orcid.org/0000-0002-1612-3609
Christian F ClarenbachDivision of Pulmonary Medicine, University Hospital of Zurich, Zurich, Switzerland.ORCID https://orcid.org/0000-0003-2158-2321
Katrin HostettlerClinics of Respiratory Medicine, University Hospital Basel, Basel, Switzerland.ORCID https://orcid.org/0000-0001-8118-7441
Sabina A GulerDepartment of Pulmonary Medicine, Inselspital, Bern University Hospital, Bern, Switzerland.ORCID https://orcid.org/0000-0002-9833-5911
Louis MercierDivision of Pulmonology, Department of Medicine, CHUV, Lausanne University Hospital, University of Lausanne, Lausanne, Switzerland.
Niki UbagsDivision of Pulmonology, Department of Medicine, CHUV, Lausanne University Hospital, University of Lausanne, Lausanne, Switzerland.ORCID https://orcid.org/0000-0002-0177-4134
Manuela Funke-ChambourDepartment of Pulmonary Medicine, Inselspital, Bern University Hospital, Bern, Switzerland.ORCID https://orcid.org/0000-0003-3417-5872
Christophe von GarnierDivision of Pulmonology, Department of Medicine, CHUV, Lausanne University Hospital, University of Lausanne, Lausanne, Switzerland.ORCID https://orcid.org/0000-0003-3585-9176
Metropolitan University · BDUniversity of Lausanne · CHUniversity Hospital of Bern · CHKantonsspital St. Gallen · CHUniversity Hospital of Basel · CHUniversity Hospital of Zurich · CH

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Background: High bacterial burden in the lung microbiota predicts progression of idiopathic pulmonary fibrosis (IPF). Azithromycin (AZT) is a macrolide antibiotic known to alter the lung microbiota in several chronic pulmonary diseases, and observational studies have shown a positive effect of AZT on mortality and hospitalisation rate in IPF. However, the effect of AZT on the lung microbiota in IPF remains unknown. Methods: We sought to determine the impact of a 3-month course of AZT on the lung microbiota in IPF. We assessed sputum and oropharyngeal swab specimens from 24 adults with IPF included in a randomised controlled crossover trial of oral AZT 500 mg 3 times per week. 16S rRNA gene amplicon sequencing and quantitative PCR (qPCR) were performed to assess bacterial communities. Antibiotic resistance genes (ARGs) were assessed using real-time qPCR. Results: AZT significantly decreased community diversity with a stronger and more persistent effect in the lower airways (sputum). AZT treatment altered the temporal kinetics of the upper (oropharyngeal swab) and lower airway microbiota, increasing community similarity between the two sites for 1 month after macrolide cessation. Patients with an increase in ARG carriage had lower bacterial density and enrichment of the genus Conclusions: AZT caused sustained changes in the diversity and composition of the upper and lower airway microbiota in IPF, with effects on the temporal and spatial dynamics between the two sites.

Identifiers

PMID37228285
PMCPMC10204823
OpenAlexW4361271737

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.