Evidence map›Paper›PMID 37228042›Full record

ArticleThe Plant journal : for cell and molecular biology2023

Reaching for the off switch in nucleolar dominance.

Craig S Pikaard, Chinmayi Chandrasekhara, Anastasia McKinlay, Ramya Enganti, Dalen Fultz

Open access · hybridAbstract read
In one paragraph

Article in The Plant journal : for cell and molecular biology, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
2.2field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 14 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Regulation of nucleolar dominance through allopolyploidization of hexaploid wheat.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2025
    Article
  5. Review
  6. Article
  7. Transcriptional Silencing of 35S rDNA inInternational journal of molecular sciences · 2024
    Article
  8. Genome Variability in Artificial Allopolyploid Hybrids ofInternational journal of molecular sciences · 2024
    Article
  9. Review
  10. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

Craig S PikaardDepartment of Biology, Indiana University, Bloomington, Indiana, USA.ORCID 0000-0001-8204-7459
Chinmayi ChandrasekharaDepartment of Biology, Indiana University, Bloomington, Indiana, USA.
Anastasia McKinlayDepartment of Biology, Indiana University, Bloomington, Indiana, USA.
Ramya EngantiDepartment of Biology, Indiana University, Bloomington, Indiana, USA.
Dalen FultzDepartment of Biology, Indiana University, Bloomington, Indiana, USA.
Howard Hughes Medical Institute · USIndiana University Bloomington · US

Funding

MOLECULAR GENETICS OF NUCLEOLAR DOMINANCER01GM060380 · NIGMS · WASHINGTON UNIVERSITY · PI PIKAARD, CRAIG STUART · 2000 to 2012
$3.3M
Howard Hughes Medical InstituteNIGMS NIH HHS R01 GM060380
6 · The paper itself

Abstract

Nucleolus organizer regions (NORs) are eukaryotic chromosomal loci where ribosomal RNA (rRNA) genes are clustered, typically in hundreds to thousands of copies. Transcription of these rRNA genes by RNA polymerase I and processing of their transcripts results in the formation of the nucleolus, the sub-nuclear domain in which ribosomes are assembled. Approximately 90 years ago, cytogenetic observations revealed that NORs inherited from the different parents of an interspecific hybrid sometimes differ in morphology at metaphase. Fifty years ago, those chromosomal differences were found to correlate with differences in rRNA gene transcription and the phenomenon became known as nucleolar dominance. Studies of the past 30 years have revealed that nucleolar dominance results from selective rRNA gene silencing, involving repressive chromatin modifications, and occurs in pure species as well as hybrids. Recent evidence also indicates that silencing depends on the NOR in which an rRNA gene is located, and not on the gene's sequence. In this perspective, we discuss how our thinking about nucleolar dominance has shifted over time from the kilobase scale of individual genes to the megabase scale of NORs and chromosomes and questions that remain unanswered in the search for a genetic and biochemical understanding of the off switch.

Indexed as

Cell NucleolusRNA, RibosomalChromosomesNucleolus Organizer RegionRNA, RibosomalArabidopsis suecicaArabidopsis thalianaBrassica allopolyploidschromatinDNA methylationhistone modificationnucleolusnucleolus organizer regionribosomal RNArRNA genetranscriptional silencing

Identifiers

PMID37228042
PMCPMC10524600
OpenAlexW4378211526

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.