Evidence map›Paper›PMID 37227264›Full record

ArticleMicrobial genomics2023

Genomic epidemiology of

Assel Akhmetova, Jimena Guerrero, Paul McAdam, Liliana C M Salvador, Joseph Crispell, John Lavery, Eleanor Presho, Rowland R Kao, Roman Biek, Fraser Menzies and 11 more

Open access · goldAbstract read
In one paragraph

Article in Microbial genomics, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 27 papers.

0numbers the graph read from it
0cells of the map it votes in
27citing papers in PubMed
7.3field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

27 citing papers in PubMed, 43 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Enhanced analysis of the genomic diversity ofFrontiers in microbiology · 2025
    Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Population structure and history ofMicrobiology spectrum · 2024
    Article
  17. Whole-Genome sequencing in routineMicrobial genomics · 2024
    Article
  18. Genomic comparison betweenFrontiers in veterinary science · 2024
    Article
  19. Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

21 authors at 10 institutions in 5 countries.

Assel AkhmetovaUniversity of Glasgow, Glasgow, UK.
Jimena GuerreroHospital Juarez de Mexico, Mexico City, Mexico.
Paul McAdamFios Genomics, Edinburgh, UK.
Liliana C M SalvadorPresent address: School of Animal and Comparative Biomedical Sciences, University of Arizona, AZ, Tucson, USA.
Joseph CrispellForeign Commonwealth and Development Office, Glasgow, UK.
John LaveryDepartment for the Economy, Belfast, UK.
Eleanor PreshoAgrifood and Biosciences Institute, Belfast, UK.
Rowland R KaoUniversity of Edinburgh, Roslin Institute, Edinburgh, UK.
Roman BiekUniversity of Glasgow, Glasgow, UK.
Fraser MenziesDepartment of Agriculture, Environment and Rural Affairs (DAERA), Belfast, UK.
Nigel TrimbleDepartment of Agriculture, Environment and Rural Affairs (DAERA), Belfast, UK.
Roland HarwoodDepartment of Agriculture, Environment and Rural Affairs (DAERA), Belfast, UK.
P Theo PeplerUniversity of Glasgow, Glasgow, UK.
Katarina OravcovaUniversity of Glasgow, Glasgow, UK.
Jordon GrahamFarmvet Systems Ltd, Moneymore, UK.
Robin SkuceAgrifood and Biosciences Institute, Belfast, UK.
Louis du PlessisDepartment of Biosystems Science and Engineering, ETH Zurich, Basel, Switzerland.
Suzan ThompsonAgrifood and Biosciences Institute, Belfast, UK.
Lorraine WrightAgrifood and Biosciences Institute, Belfast, UK.
Andrew W ByrneDepartment of Agriculture Food and the Marine (DAFM), Dublin, Ireland.
Adrian R AllenAgrifood and Biosciences Institute, Belfast, UK.
Agri Food and Biosciences Institute · GBUniversity of Glasgow · GBDepartment for the Economy · GBDepartment of Agriculture Food and the Marine · IEFios Genomics (United Kingdom) · GBForeign and Commonwealth Office · GBHospital Juárez de México · MXRoslin Institute · GBSIB Swiss Institute of Bioinformatics · CHUniversity of Arizona · US

Funding

Biotechnology and Biological Sciences Research Council BB/M01262XBiotechnology and Biological Sciences Research Council BB/P0105598
6 · The paper itself

Abstract

Bovine tuberculosis (bTB) is a costly, epidemiologically complex, multi-host, endemic disease. Lack of understanding of transmission dynamics may undermine eradication efforts. Pathogen whole-genome sequencing improves epidemiological inferences, providing a means to determine the relative importance of inter- and intra-species host transmission for disease persistence. We sequenced an exceptional data set of 619

Indexed as

MustelidaeMycobacterium bovisTuberculosis, BovineAnimalsCattleGenomicsNorthern Irelandbovine tuberculosisgenome sequencingtransmission dynamics

Identifiers

PMID37227264
PMCPMC10272874
OpenAlexW4378173309

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.