Evidence map›Paper›PMID 37226883›Full record

ArticleJournal of cell science2023

Cell-based optimization and characterization of genetically encoded location-based biosensors for Cdc42 or Rac activity.

Eike K Mahlandt, Gabriel Kreider-Letterman, Anna O Chertkova, Rafael Garcia-Mata, Joachim Goedhart

Open access · hybridAbstract read
In one paragraph

Article in Journal of cell science, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
1.3field-weighted citation impact, top 22% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 6 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Local RhoA activation induces septin recruitment.bioRxiv : the preprint server for biology · 2025
    Article
  7. Article
  8. Patterning of the cell cortex by Rho GTPases.Nature reviews. Molecular cell biology · 2024
    Review
  9. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 2 countries.

Eike K MahlandtSwammerdam Institute for Life Sciences, Section of Molecular Cytology, van Leeuwenhoek Centre for Advanced Microscopy, University of Amsterdam, Science Park 904, 1098 XH, Amsterdam, The Netherlands.ORCID 0000-0001-9458-8543
Gabriel Kreider-LettermanDepartment of Biological Sciences, University of Toledo, Toledo, OH 43606, USA.ORCID 0000-0002-3081-6698
Anna O ChertkovaSwammerdam Institute for Life Sciences, Section of Molecular Cytology, van Leeuwenhoek Centre for Advanced Microscopy, University of Amsterdam, Science Park 904, 1098 XH, Amsterdam, The Netherlands.
Rafael Garcia-MataDepartment of Biological Sciences, University of Toledo, Toledo, OH 43606, USA.ORCID 0000-0002-7116-4411
Joachim GoedhartSwammerdam Institute for Life Sciences, Section of Molecular Cytology, van Leeuwenhoek Centre for Advanced Microscopy, University of Amsterdam, Science Park 904, 1098 XH, Amsterdam, The Netherlands.ORCID 0000-0002-0630-3825
University of Amsterdam · NLUniversity of Toledo · US

Funding

Regulation of epithelial junctions and lumen morphogenesis by the Scribble/SGEF/Dlg1 complexR01GM136826 · NIGMS · UNIVERSITY OF TOLEDO · PI GARCIA-MATA, RAFAEL · 2020 to 2023
$1.5M
NIGMS NIH HHS R01 GM136826NIH HHS R01-GM136826-01
6 · The paper itself

Abstract

Rac (herein referring to the Rac family) and Cdc42 are Rho GTPases that regulate the formation of lamellipoda and filopodia, and are therefore crucial in processes such as cell migration. Relocation-based biosensors for Rac and Cdc42 have not been characterized well in terms of their specificity or affinity. In this study, we identify relocation sensor candidates for both Rac and Cdc42. We compared their (1) ability to bind the constitutively active Rho GTPases, (2) specificity for Rac and Cdc42, and (3) relocation efficiency in cell-based assays. Subsequently, the relocation efficiency was improved by a multi-domain approach. For Rac1, we found a sensor candidate with low relocation efficiency. For Cdc42, we found several sensors with sufficient relocation efficiency and specificity. These optimized sensors enable the wider application of Rho GTPase relocation sensors, which was showcased by the detection of local endogenous Cdc42 activity at assembling invadopodia. Moreover, we tested several fluorescent proteins and HaloTag for their influence on the recruitment efficiency of the Rho location sensor, to find optimal conditions for a multiplexing experiment. This characterization and optimization of relocation sensors will broaden their application and acceptance.

Indexed as

Podosomesrho GTP-Binding ProteinsCell MovementPseudopodiarho GTP-Binding ProteinsAffinityBiosensorCdc42Fluorescent proteinMultiplex imagingRho GTPase

Identifiers

PMID37226883
PMCPMC10234108
OpenAlexW4378173523

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.