Evidence map›Paper›PMID 37226084›Full record

ArticleBMC genomics2023

Employing computational tools to design a multi-epitope vaccine targeting human immunodeficiency virus-1 (HIV-1).

Hamza Sher, Hafsa Sharif, Tahreem Zaheer, Sarmad Ahmad Khan, Amjad Ali, Hasnain Javed, Aneela Javed

Abstract read
In one paragraph

Article in BMC genomics, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Hamza SherAtta Ur Rahman School of Applied Biosciences, National University of Sciences and Technology, Islamabad, Pakistan.
Hafsa SharifAtta Ur Rahman School of Applied Biosciences, National University of Sciences and Technology, Islamabad, Pakistan.
Tahreem ZaheerAtta Ur Rahman School of Applied Biosciences, National University of Sciences and Technology, Islamabad, Pakistan.
Sarmad Ahmad KhanGerman Cancer Research Center (DFKZ), German Cancer Research Consortium (DKTK), Heidelberg, Germany.
Amjad AliAtta Ur Rahman School of Applied Biosciences, National University of Sciences and Technology, Islamabad, Pakistan.
Hasnain JavedAdvanced Diagnostic Lab BSL-3, Punjab AIDS Control Program, Primary and Secondary Healthcare Department, Government of the Punjab, Lahore, Pakistan.
Aneela JavedAtta Ur Rahman School of Applied Biosciences, National University of Sciences and Technology, Islamabad, Pakistan. javedaneela19@gmail.com.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundDespite being in the 21

resultsHIV-1a and HIV-1b were subjected to antigenicity, allergenicity, structural quality analysis, immune simulations, and MD (molecular dynamics) simulations. Both proposed multi-epitope vaccines were found to be antigenic, non-allergenic, stable, and induce cellular, humoral, and innate immune responses. TLR-3 docking and in-silico cloning of both constructs were also performed.

conclusionOur results indicate HIV-1b to be more promising than HIV-1a; experimental validations can confirm the efficacy and safety of both constructs and in-vivo efficacy in animal models.

Indexed as

HIV-1HIV InfectionsAcetaminophenAnimalsEpitopes, B-LymphocyteEpitopes, T-LymphocyteHumansAcetaminophenEpitopes, B-LymphocyteEpitopes, T-LymphocyteAcquired immunodeficiency syndromeBioinformaticsComputational biologyHuman immunodeficiency virusImmunityImmuno-informaticsToll like receptor-3Vaccinology

Identifiers

PMID37226084
PMCPMC10206567

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.