Evidence map›Paper›PMID 37226080›Full record

ArticleBMC genomics2023

Genome sequence of Ophryocystis elektroscirrha, an apicomplexan parasite of monarch butterflies: cryptic diversity and response to host-sequestered plant chemicals.

Andrew J Mongue, Simon H Martin, Rachel E V Manweiler, Helena Scullion, Jordyn L Koehn, Jacobus C de Roode, James R Walters

Open access · goldAbstract read
In one paragraph

Article in BMC genomics, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
1.5field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 10 citations in OpenAlex.

  1. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 4 institutions in 2 countries.

Andrew J MongueDepartment of Entomology and Nematology, University of Florida, Gainesville, USA. andrew.mongue@ufl.edu.
Simon H MartinInstitute of Ecology and Evolution, University of Edinburgh, Edinburgh, UK.
Rachel E V ManweilerDepartment of Ecology and Evolutionary Biology, University of Kansas, Lawrence, USA.
Helena ScullionDepartment of Entomology and Nematology, University of Florida, Gainesville, USA.
Jordyn L KoehnDepartment of Ecology and Evolutionary Biology, University of Kansas, Lawrence, USA.
Jacobus C de RoodeBiology Department, Emory University, Atlanta, USA.
James R WaltersDepartment of Ecology and Evolutionary Biology, University of Kansas, Lawrence, USA.
University of Kansas · USUniversity of Florida · USEmory University · USUniversity of Edinburgh · GB

Funding

National Science Foundation ABI 1661454
6 · The paper itself

Abstract

Apicomplexa are ancient and diverse organisms which have been poorly characterized by modern genomics. To better understand the evolution and diversity of these single-celled eukaryotes, we sequenced the genome of Ophryocystis elektroscirrha, a parasite of monarch butterflies, Danaus plexippus. We contextualize our newly generated resources within apicomplexan genomics before answering longstanding questions specific to this host-parasite system. To start, the genome is miniscule, totaling only 9 million bases and containing fewer than 3,000 genes, half the gene content of two other sequenced invertebrate-infecting apicomplexans, Porospora gigantea and Gregarina niphandrodes. We found that O. elektroscirrha shares different orthologs with each sequenced relative, suggesting the true set of universally conserved apicomplexan genes is very small indeed. Next, we show that sequencing data from other potential host butterflies can be used to diagnose infection status as well as to study diversity of parasite sequences. We recovered a similarly sized parasite genome from another butterfly, Danaus chrysippus, that was highly diverged from the O. elektroscirrha reference, possibly representing a distinct species. Using these two new genomes, we investigated potential evolutionary response by parasites to toxic phytochemicals their hosts ingest and sequester. Monarch butterflies are well-known to tolerate toxic cardenolides thanks to changes in the sequence of their Type II ATPase sodium pumps. We show that Ophryocystis completely lacks Type II or Type 4 sodium pumps, and related proteins PMCA calcium pumps show extreme sequence divergence compared to other Apicomplexa, demonstrating new avenues of research opened by genome sequencing of non-model Apicomplexa.

Indexed as

ApicomplexaButterfliesParasitesAnimalsSodiumSodium-Potassium-Exchanging ATPaseSodiumSodium-Potassium-Exchanging ATPaseApicomplexan genomicsATPaseCryptic speciesMonarch butterfly parasiteOEProtist genomicsSodium potassium pump

Identifiers

PMID37226080
PMCPMC10210345
OpenAlexW4377982001

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.