Evidence map›Paper›PMID 37225767›Full record

ArticleScientific data2023

AraDiv: a dataset of functional traits and leaf hyperspectral reflectance of Arabidopsis thaliana.

Maria Stefania Przybylska, Cyrille Violle, Denis Vile, J F Scheepens, Benoit Lacombe, Xavier Le Roux, Lisa Perrier, Lou Sales-Mabily, Mariette Laumond, Mariona Vinyeta and 5 more

Abstract readDataset
In one paragraph

Article in Scientific data, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed.

  1. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors.

Maria Stefania PrzybylskaCEFE, Univ Montpellier, CNRS, EPHE, IRD, Montpellier, France. mariastefaniaribeiro@gmail.com.ORCID 0000-0002-9941-892X
Cyrille ViolleCEFE, Univ Montpellier, CNRS, EPHE, IRD, Montpellier, France.ORCID 0000-0002-2471-9226
Denis VileLEPSE, Univ Montpellier, INRAE, Institut Agro Montpellier, Montpellier, France.ORCID 0000-0002-7948-1462
J F ScheepensPlant Evolutionary Ecology, Institute of Ecology, Evolution and Diversity, Faculty of Biological Sciences, Goethe University Frankfurt, Max-von-Laue-Str. 13, 60438, Frankfurt am Main, Germany.ORCID 0000-0003-1650-2008
Benoit LacombeIPSIM, Univ Montpellier, CNRS, INRAE, Institut Agro Montpellier, Montpellier, France.ORCID 0000-0001-9924-3093
Xavier Le RouxMicrobial Ecology Centre, UMR 1418 INRAE, UMR 5557 CNRS, INRAE, CNRS, University Lyon 1, University of Lyon, VetAgroSup, Villeurbanne, France.
Lisa PerrierCEFE, Univ Montpellier, CNRS, EPHE, IRD, Montpellier, France.
Lou Sales-MabilyCEFE, Univ Montpellier, CNRS, EPHE, IRD, Montpellier, France.
Mariette LaumondCEFE, Univ Montpellier, CNRS, EPHE, IRD, Montpellier, France.
Mariona VinyetaCEFE, Univ Montpellier, CNRS, EPHE, IRD, Montpellier, France.
Pierre MoulinCEFE, Univ Montpellier, CNRS, EPHE, IRD, Montpellier, France.ORCID 0009-0007-3980-6633
Gregory BeurierCIRAD, UMR AGAP Institut, F-34398, Montpellier, France.
Lauriane RouanCIRAD, UMR AGAP Institut, F-34398, Montpellier, France.
Denis CornetCIRAD, UMR AGAP Institut, F-34398, Montpellier, France.ORCID 0000-0001-9297-2680
François VasseurCEFE, Univ Montpellier, CNRS, EPHE, IRD, Montpellier, France. francois.vasseur@cefe.cnrs.fr.ORCID 0000-0002-0575-6216

Funding

Agence Nationale de la Recherche (French National Research Agency) ANR-17-CE02-0018-01Deutsche Forschungsgemeinschaft (German Research Foundation) SCHE 1899/2-1
6 · The paper itself

Abstract

Data from functional trait databases have been increasingly used to address questions related to plant diversity and trait-environment relationships. However, such databases provide intraspecific data that combine individual records obtained from distinct populations at different sites and, hence, environmental conditions. This prevents distinguishing sources of variation (e.g., genetic-based variation vs. phenotypic plasticity), a necessary condition to test for adaptive processes and other determinants of plant phenotypic diversity. Consequently, individual traits measured under common growing conditions and encompassing within-species variation across the occupied geographic range have the potential to leverage trait databases with valuable data for functional and evolutionary ecology. Here, we recorded 16 functional traits and leaf hyperspectral reflectance (NIRS) data for 721 widely distributed Arabidopsis thaliana natural accessions grown in a common garden experiment. These data records, together with meteorological variables obtained during the experiment, were assembled to create the AraDiv dataset. AraDiv is a comprehensive dataset of A. thaliana's intraspecific variability that can be explored to address questions at the interface of genetics and ecology.

Indexed as

ArabidopsisAdaptation, PhysiologicalBiological EvolutionDatabases, FactualPlant Leaves

Identifiers

PMID37225767
PMCPMC10209097

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.