Evidence map›Paper›PMID 37225711›Full record

ArticleNature communications2023

Neural crest E-cadherin loss drives cleft lip/palate by epigenetic modulation via pro-inflammatory gene-environment interaction.

Lucas Alvizi, Diogo Nani, Luciano Abreu Brito, Gerson Shigeru Kobayashi, Maria Rita Passos-Bueno, Roberto Mayor

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
6.3field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 20 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 3 countries.

Lucas AlviziDepartment of Cell and Developmental Biology, University College London, Gower Street, London, WC1E 6BT, UK. l.alvizi@ucl.ac.uk.ORCID 0000-0002-8058-6261
Diogo NaniCentro de Estudos do Genoma Humano e Celulas-Tronco, Departamento de Genetica e Biologia Evolutiva, Instituto de Biociencias, Universidade de Sao Paulo, Sao Paulo, Brazil.ORCID 0000-0001-7282-5982
Luciano Abreu BritoCentro de Estudos do Genoma Humano e Celulas-Tronco, Departamento de Genetica e Biologia Evolutiva, Instituto de Biociencias, Universidade de Sao Paulo, Sao Paulo, Brazil.
Gerson Shigeru KobayashiCentro de Estudos do Genoma Humano e Celulas-Tronco, Departamento de Genetica e Biologia Evolutiva, Instituto de Biociencias, Universidade de Sao Paulo, Sao Paulo, Brazil.
Maria Rita Passos-BuenoCentro de Estudos do Genoma Humano e Celulas-Tronco, Departamento de Genetica e Biologia Evolutiva, Instituto de Biociencias, Universidade de Sao Paulo, Sao Paulo, Brazil. passos@ib.usp.br.ORCID 0000-0002-9248-3008
Roberto MayorDepartment of Cell and Developmental Biology, University College London, Gower Street, London, WC1E 6BT, UK. r.mayor@ucl.ac.uk.ORCID 0000-0001-9053-9613
Instituto Biológico · BRMRC Laboratory for Molecular Cell Biology · GBUniversidad Mayor · CL

Funding

Medical Research Council M008517Medical Research Council MR/S007792/1Medical Research Council MR/W001292/1Wellcome TrustWellcome Trust 102489/Z/13/Z
6 · The paper itself

Abstract

Gene-environment interactions are believed to play a role in multifactorial phenotypes, although poorly described mechanistically. Cleft lip/palate (CLP), the most common craniofacial malformation, has been associated with both genetic and environmental factors, with little gene-environment interaction experimentally demonstrated. Here, we study CLP families harbouring CDH1/E-Cadherin variants with incomplete penetrance and we explore the association of pro-inflammatory conditions to CLP. By studying neural crest (NC) from mouse, Xenopus and humans, we show that CLP can be explained by a 2-hit model, where NC migration is impaired by a combination of genetic (CDH1 loss-of-function) and environmental (pro-inflammatory activation) factors, leading to CLP. Finally, using in vivo targeted methylation assays, we demonstrate that CDH1 hypermethylation is the major target of the pro-inflammatory response, and a direct regulator of E-cadherin levels and NC migration. These results unveil a gene-environment interaction during craniofacial development and provide a 2-hit mechanism to explain cleft lip/palate aetiology.

Indexed as

CadherinsCleft LipCleft PalateAnimalsAntigens, CDEpigenesis, GeneticGene-Environment InteractionHumansMiceNeural CrestAntigens, CDCadherinsCDH1 protein, human

Identifiers

PMID37225711
PMCPMC10209087
OpenAlexW4377984771

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.