Evidence map›Paper›PMID 37223744›Full record

ArticlemicroLife2023

Analysis of a logical regulatory network reveals how Fe-S cluster biogenesis is controlled in the face of stress.

Firas Hammami, Laurent Tichit, Béatrice Py, Frédéric Barras, Pierre Mandin, Elisabeth Remy

Open access · goldAbstract read
PubMed Full text at PMC Publisher
In one paragraph

Article in microLife, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed, 1 pooled it
0.3field-weighted citation impact, top 54% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 1 synthesis or guideline pooled it, 5 citations in OpenAlex.

  1. Pooled it
  2. Review
  3. Small RNA OxyS induces resistance to aminoglycosides during oxidative stress by controlling Fe-S cluster biogenesis inProceedings of the National Academy of Sciences of the United States of America · 2024
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Firas HammamiLaboratoire de Chimie Bactérienne (UMR7283), IMM, IM2B, CNRS, Aix-Marseille University, 13009 Marseille, France.
Laurent TichitI2M, CNRS, Aix-Marseille University, 13009 Marseille, France.
Béatrice PyLaboratoire de Chimie Bactérienne (UMR7283), IMM, IM2B, CNRS, Aix-Marseille University, 13009 Marseille, France.ORCID https://orcid.org/0000-0002-9541-8084
Frédéric BarrasInstitut Pasteur, Département de Microbiologie, Université Paris-Cité, UMR CNRS 6047, SAMe Unit, F-75015 Paris, France.
Pierre MandinLaboratoire de Chimie Bactérienne (UMR7283), IMM, IM2B, CNRS, Aix-Marseille University, 13009 Marseille, France.ORCID https://orcid.org/0000-0002-4870-941X
Elisabeth RemyI2M, CNRS, Aix-Marseille University, 13009 Marseille, France.
Centre National de la Recherche Scientifique · FR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Iron-sulfur (Fe-S) clusters are important cofactors conserved in all domains of life, yet their synthesis and stability are compromised in stressful conditions such as iron deprivation or oxidative stress. Two conserved machineries, Isc and Suf, assemble and transfer Fe-S clusters to client proteins. The model bacterium

Indexed as

bacterial regulationFe-S cluster biogenesisIscRlogical modelingmathematical modelingregulatory networks

Identifiers

PMID37223744
PMCPMC10117729
OpenAlexW4323066807

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.