Evidence map›Paper›PMID 37222808›Full record

ArticleJournal of cancer research and clinical oncology2023

Development and validation of a gene expression-based nomogram to predict the prognosis of patients with cholangiocarcinoma.

Wei Wang, Chen Wu, Lijun Xu, Peilin Li, Kai Wang, Guangbing Li, Shanshan Zhao, Yongsheng Li, Xiaoyu Fan, Weifeng Wang and 3 more

Abstract read
In one paragraph

Article in Journal of cancer research and clinical oncology, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 1 synthesis or guideline pooled it.

  1. Pooled it
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors.

Wei Wang *Interventional Department, The Second Hospital of Shandong University, Jinan, 250033, China.
Chen Wu *Department of Hepatobiliary Surgery, Shandong Provincial Hospital, Shandong First Medical University, Jinan, 250021, China.
Lijun XuDepartment III of Radiotherapy, The Second People's Hospital of Dezhou City, Dezhou, Shandong, China.
Peilin LiDepartment of Hepatobiliary Surgery, The Second People's Hospital of Dezhou City, Dezhou, Shandong, China.
Kai WangShanghai OrigiMed Co., Ltd, Shanghai, China.
Guangbing LiDepartment of Hepatobiliary Surgery, Shandong Provincial Hospital, Shandong First Medical University, Jinan, 250021, China.
Shanshan ZhaoInterventional Department, The Second Hospital of Shandong University, Jinan, 250033, China.
Yongsheng LiMianyang Lide Electronics Co., LTD, Mianyang, China.
Xiaoyu FanShanghai OrigiMed Co., Ltd, Shanghai, China.
Weifeng WangShanghai OrigiMed Co., Ltd, Shanghai, China.
Meizhen HuShanghai OrigiMed Co., Ltd, Shanghai, China.
Jing WuInterventional Department, The Second Hospital of Shandong University, Jinan, 250033, China.
Shifeng XuDepartment of Hepatobiliary Surgery, Shandong Provincial Hospital, Shandong First Medical University, Jinan, 250021, China. shifengxu2008@163.com.

Funding

Foundation of Science and Technology Research Institute of Shandong University 6010221007Natural Science Foundation of Shandong Province ZR2022MH169Youth Foundation of the Second Hospital of Shandong University 2022YP6
6 · The paper itself

Abstract

aimTo establish and validate a prognostic nomogram of cholangiocarcinoma (CCA) using independent clinicopathological and genetic mutation factors.

methods213 patients with CCA (training cohort n = 151, validation cohort n = 62) diagnosed from 2012 to 2018 were included from multi-centers. Deep sequencing targeting 450 cancer genes was performed. Independent prognostic factors were selected by univariate and multivariate Cox analyses. The clinicopathological factors combined with (A)/without (B) the gene risk were used to establish nomograms for predicting overall survival (OS). The discriminative ability and calibration of the nomograms were assessed using C-index values, integrated discrimination improvement (IDI), decision curve analysis (DCA), and calibration plots.

resultsThe clinical baseline information and gene mutations in the training and validation cohorts were similar. SMAD4, BRCA2, KRAS, NF1, and TERT were found to be related with CCA prognosis. Patients were divided into low-, median-, and high-risk groups according to the gene mutation, the OS of which was 42.7 ± 2.7 ms (95% CI 37.5-48.0), 27.5 ± 2.1 ms (95% CI 23.3-31.7), and 19.8 ± 4.0 ms (95% CI 11.8-27.8) (p < 0.001), respectively. The systemic chemotherapy improved the OS in high and median risk groups, but not in the low-risk group. The C-indexes of the nomogram A and B were 0.779 (95% CI 0.693-0.865) and 0.725 (95% CI 0.619-0.831), p < 0.01, respectively. The IDI was 0.079. The DCA showed a good performance and the prognostic accuracy was validated in the external cohort.

conclusionGene risk has the potential to guide treatment decision for patients at different risks. The nomogram combined with gene risk showed a better accuracy in predicting OS of CCA than not.

Indexed as

Bile Duct NeoplasmsCholangiocarcinomaBile Ducts, IntrahepaticGene ExpressionHumansNomogramsPrognosisSEER ProgramCholangiocarcinomaClinicopathological informationGene mutationNomogramPrognosis

Identifiers

PMID37222808
PMCPMC10423111

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.