Evidence map›Paper›PMID 37222600›Full record

ArticleMicrobiology spectrum2023

B G O Tchan, S Ngazoa-Kakou, N Aka, N K B Apia, N Hammoudi, M Drancourt, J Saad

Abstract read
PubMed Full text at PMC Publisher
In one paragraph

Article in Microbiology spectrum, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

B G O TchanIRD, MEPHI, IHU Méditerranée Infection, Aix-Marseille-Université, Marseille, France.
S Ngazoa-KakouPlateforme de Biologie Moléculaire, Institut Pasteur de Côte d'Ivoire, Abidjan, Côte d'Ivoire.
N AkaUnité des Mycobactéries Tuberculeuses et Atypiques, Institut Pasteur de Côte d'Ivoire, Abidjan, Côte d'Ivoire.
N K B ApiaPlateforme de Biologie Moléculaire, Institut Pasteur de Côte d'Ivoire, Abidjan, Côte d'Ivoire.
N HammoudiIRD, MEPHI, IHU Méditerranée Infection, Aix-Marseille-Université, Marseille, France.
M DrancourtIRD, MEPHI, IHU Méditerranée Infection, Aix-Marseille-Université, Marseille, France.ORCID 0000-0003-0768-1139
J SaadIRD, MEPHI, IHU Méditerranée Infection, Aix-Marseille-Université, Marseille, France.ORCID 0000-0002-6187-5893

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Mycobacterium ulcerans, an environmental opportunistic pathogen, causes necrotic cutaneous and subcutaneous lesions, named Buruli ulcers, in tropical countries. PCR-derived tests used to detect M. ulcerans in environmental and clinical samples do not allow one-shot detection, identification, and typing of M. ulcerans among closely related Mycobacterium marinum complex mycobacteria. We established a 385-member M. marinum/M. ulcerans complex whole-genome sequence database by assembling and annotating 341 M. marinum/M. ulcerans complex genomes and added 44 M. marinum/M. ulcerans complex whole-genome sequences already deposited in the NCBI database. Pangenome, core genome, and single-nucleotide polymorphism (SNP) distance-based comparisons sorted the 385 strains into 10 M. ulcerans taxa and 13 M. marinum taxa, correlating with the geographic origin of strains. Aligning conserved genes identified one

Indexed as

Buruli UlcerMycobacterium ulceransCote d'IvoireHumansPersonal Protective EquipmentReal-Time Polymerase Chain ReactionBuruli ulcergenotypingMycobacterium marinumMycobacterium ulceransPPE genewhole-genome sequencing

Identifiers

PMID37222600
PMCPMC10269924

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.