Evidence map›Paper›PMID 37221310›Full record

ArticleScientific reports2023

Identification of novel interacts partners of ADAR1 enzyme mediating the oncogenic process in aggressive breast cancer.

Najat Binothman, Majidah Aljadani, Bandar Alghanem, Mohammed Y Refai, Mamoon Rashid, Abeer Al Tuwaijri, Nouf H Alsubhi, Ghadeer I Alrefaei, Muhammad Yasir Khan, Sultan N Sonbul and 5 more

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
1.8field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 12 citations in OpenAlex.

  1. Deaminase Modulation Driving a New Era in Drug Development.International journal of molecular sciences · 2025
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors at 4 institutions in 1 country.

Najat BinothmanDepartment of Chemistry, College of Sciences and Arts, King Abdulaziz University, Rabigh, Saudi Arabia. nbinothman@kau.edu.sa.
Majidah AljadaniDepartment of Chemistry, College of Sciences and Arts, King Abdulaziz University, Rabigh, Saudi Arabia.
Bandar AlghanemMedical Research Core Facility and Platforms (MRCFP), King Abdullah International Medical Research Center/King Saud bin Abdulaziz University for Health Sciences (KSAU-HS), King Abdulaziz Medical City (KAMC), National Guard Health Affairs (NGHA), Riyadh, Saudi Arabia.
Mohammed Y RefaiDepartment of Biochemistry, College of Science, University of Jeddah, Jeddah, Saudi Arabia.
Mamoon RashidDepartment of AI and Bioinformatics, King Abdullah International Medical Research Center (KAIMRC), King Saud Bin Abdulaziz University for Health Sciences (KSAU-HS), King Abdulaziz Medical City, Ministry of National Guard Health Affairs, P.O. Box 22490, Riyadh, 11426, Saudi Arabia.
Abeer Al TuwaijriMedical Genomics Research Department, King Abdullah International Medical Research Center (KAIMRC), Ministry of National Guard Health Affairs (MNGH), Riyadh, Saudi Arabia.
Nouf H AlsubhiBiological Sciences Department, College of Science & Arts, King Abdulaziz University, Rabigh, 21911, Saudi Arabia.
Ghadeer I AlrefaeiDepartment of Biology, College of Science, University of Jeddah, Jeddah, Saudi Arabia.
Muhammad Yasir KhanVaccine and Immunotherapy Unit, King Fahad Medical Research Center, King Abdulaziz University Saudi Arabia, Jeddah, Saudi Arabia.
Sultan N SonbulBiochemistry Department, Faculty of Sciences, King Abdulaziz University, Jeddah, Saudi Arabia.
Fadwa AljoudDepartment of Biology, Faculty of Science, King Abdulaziz University, Jeddah, 21589, Saudi Arabia.
Sultan AlhayyaniDepartment of Chemistry, College of Sciences and Arts, King Abdulaziz University, Rabigh, Saudi Arabia.
Rwaa H AbdulalVaccine and Immunotherapy Unit, King Fahad Medical Research Center, King Abdulaziz University Saudi Arabia, Jeddah, Saudi Arabia.
Magdah GanashDepartment of Biology, Faculty of Science, King Abdulaziz University, Jeddah, 21589, Saudi Arabia.
Anwar M HashemVaccine and Immunotherapy Unit, King Fahad Medical Research Center, King Abdulaziz University Saudi Arabia, Jeddah, Saudi Arabia.
King Abdulaziz University · SAJeddah University · SAKing Abdullah International Medical Research Center · SAKing Abdulaziz Medical City · SA

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Triple-negative breast cancer (TNBC) subtype is characterized by aggressive clinical behavior and poor prognosis patient outcomes. Here, we show that ADAR1 is more abundantly expressed in infiltrating breast cancer (BC) tumors than in benign tumors. Further, ADAR1 protein expression is higher in aggressive BC cells (MDA-MB-231). Moreover, we identify a novel interacting partners proteins list with ADAR1 in MDA-MB-231, using immunoprecipitation assay and mass spectrometry. Using iLoop, a protein-protein interaction prediction server based on structural features, five proteins with high iloop scores were discovered: Histone H2A.V, Kynureninase (KYNU), 40S ribosomal protein SA, Complement C4-A, and Nebulin (ranged between 0.6 and 0.8). In silico analysis showed that invasive ductal carcinomas had the highest level of KYNU gene expression than the other classifications (p < 0.0001). Moreover, KYNU mRNA expression was shown to be considerably higher in TNBC patients (p < 0.0001) and associated with poor patient outcomes with a high-risk value. Importantly, we found an interaction between ADAR1 and KYNU in the more aggressive BC cells. Altogether, these results propose a new ADAR-KYNU interaction as potential therapeutic targeted therapy in aggressive BC.

Indexed as

Adenosine DeaminaseRNA-Binding ProteinsTriple Negative Breast NeoplasmsBreastComplement C4HistonesHumansADAR protein, humanAdenosine DeaminaseComplement C4HistonesRNA-Binding Proteins

Identifiers

PMID37221310
PMCPMC10206070
OpenAlexW4377940514

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.